New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3903718 = | 17 (1.020) | 5 (0.300) | 3/286 | 1.9 | 22.7% | coding (430/480 nt) | PP_3444 | glyoxalase family protein |
? | NC_002947 | 3903739 = | 17 (1.020) | coding (451/480 nt) | PP_3444 | glyoxalase family protein |
GTCTACGCCCAGGCCCTGGCCGCCGGGGGCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAG > NC_002947/3903571‑3903857 | gTCTACGCCCAGGCCCTGGCCGCCGGGGGCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACgagagg > 2:283197/1‑148 (MQ=255) tCTACGCCCAGGCCCTGGCCGCCGGGGGCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTc < 1:290482/150‑1 (MQ=255) ccAGGCCCTGGCCGCCGGGGGCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCg > 2:142837/1‑150 (MQ=255) ggCCGCCGGGGGCATCCAGGTACATCCCTTGACCGACCCGTTTTACGGGGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGaa < 2:130794/150‑1 (MQ=255) cgggggtcaggctgcgcacctgggtggcggttttgtcgatgattcgcatgaagcagctccaagctacgagcctcaagcttcaagcaaagtcgcgcggctttcaactcgtcgcttggctaccgccgaacatCTTCGCGCCCGTGCCGCGaa > 1:159136‑M1/131‑150 (MQ=255) cgggggtcaggctgcgcacctgggtggcggttttgtcgatgattcgcatgaagcagctccaagctacgagcctcaagcttcaagcaaagtcgcgcggctttcaactcgtcgcttggctaccgccgaacatCTTCGCGCCCGTGCCGCGaa > 2:298675‑M1/131‑150 (MQ=255) cgggggtcaggctgcgcacctgggtggcggttttgtcgatgattcgcatgaagcagctccaagctacgagcctcaagcttcaagcaaagtcgcgcggctttcaactcgtcgcttggctaccgccgaacatCTTCGCGCCCGTGCCGCGaa > 1:352133‑M1/131‑150 (MQ=255) ggggCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTcg > 2:284455/1‑150 (MQ=255) cAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGc > 1:306836/1‑150 (MQ=255) aCCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCtt < 2:107064/150‑1 (MQ=255) aCCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCtt < 2:299926/150‑1 (MQ=255) ccGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTg > 1:245008/1‑150 (MQ=255) gCACCCTGCAAGATCCGTTTGTCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGCAAGCCGCGCGACTTTGCTAGAAGCTTGa < 2:306084/150‑1 (MQ=255) gCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGa < 2:245008/150‑1 (MQ=255) gTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAg > 1:200267/1‑150 (MQ=255) agcaaagtcgcgcggctttcaactcgtcgcttggctaccgccgaacatATTCGCGCCCGTGCCGCGAAGAt < 1:291229‑M1/23‑1 (MQ=255) agcaaagtcgcgcggctttcaactcgtcgcttggctaccgccgaacatATTCGCGCCCGTGCCGCGAAGAt > 2:291229‑M1/49‑71 (MQ=255) tCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGc < 1:284455/150‑1 (MQ=255) caAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGc < 1:268825/150‑1 (MQ=255) ccccGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGa < 1:36428/89‑1 (MQ=255) ccccGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGa > 2:36428/1‑89 (MQ=255) ccccGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAg > 1:100190/1‑150 (MQ=255) | GTCTACGCCCAGGCCCTGGCCGCCGGGGGCATCCAGTTACATCCCTTGACCGACCAGTTTTACGGTGACCGCAGCGGCACCCTGAAAGATCCGTTTGGCAACATCTGGTTCGTGTCCACCCACAAAGAGGACCTGACCCCCGACGAGATTCGCGCCCGTGCCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAG > NC_002947/3903571‑3903857 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |