New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4477967	13 (0.780)	4 (0.250)	4/272	1.5	24.4%	coding (251/321 nt)	PP_3966	transposase
	?	NC_002947	= 4477991	NA (NA)					coding (227/321 nt)	PP_3966	transposase

AATCACCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4477817‑4477967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcaTCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCA  <  NC_002947/4477991‑4477843                                                                                                                                                                                                                                                                                                              AATCACCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATC                                                                                                                                                        >  2:184612/1‑150                            GCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑C‑‑‑TTGCCCGTGGCCGGGCAAGTGATCA                                                                                                                         <  1:133940/150‑1                                GCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑C‑‑‑TTGCCCGTGGCCGGGCAAGTGATCACGGT                                                                                                                     <  2:117259/150‑1                                  GCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACG                                                                                                                       <  2:239652/150‑1                                   CGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGG                                                                                                                      <  2:365929/150‑1                                                                                                                                                     TCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGG    >  1:184612/1‑150                                                                                                                                                      CATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGC   <  2:290131/150‑1                                                                                                                                                       ATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCA  >  1:321212/1‑150                                                                                                                                                                                                                                                                                                              AATCACCCGGGCTAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4477817‑4477967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcaTCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCA  <  NC_002947/4477991‑4477843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.