New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4647267 = | 18 (1.080) | 4 (0.240) | 4/280 | 1.6 | 19.7% | coding (420/483 nt) | PP_5658 | hypothetical protein |
? | NC_002947 | 4647285 = | 15 (0.920) | coding (438/483 nt) | PP_5658 | hypothetical protein | |||||
Rejected: Frequency below/above cutoff threshold. |
GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGC‑‑‑‑‑‑‑‑‑ < NC_002947/4647391‑4647267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGTGAAGT > NC_002947/4647285‑4647293 GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGA < 1:257440/131‑1 GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGA > 2:257440/1‑131 CCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCGGCCAGCGGCCTGGCCCGTGAAGT > 1:250555/1‑89 CCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCGGCCAGCGGCCTGGCCCGTGAAGT < 2:250555/89‑1 GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGC‑‑‑‑‑‑‑‑‑ < NC_002947/4647391‑4647267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGTGAAGT > NC_002947/4647285‑4647293 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |