New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5212189 = | 13 (0.780) | 5 (0.340) | 3/254 | 1.7 | 30.7% | intergenic (‑85/+93) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
? | NC_002947 | 5212280 = | 11 (0.740) | intergenic (‑176/+2) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
CGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5212348‑5212189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAG > NC_002947/5212280‑5212425 CGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGC < 2:23192/150‑1 GCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTAT > 1:177022/1‑150 CCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACC > 2:361989/1‑150 TTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGA > 2:46837/1‑150 CGCGGGCGGGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGG < 1:127678/150‑1 CGCGGGCGGCCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGG < 1:127675/150‑1 CACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGC > 2:277664/1‑150 CACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGC > 2:277683/1‑150 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGTGGGGCATCGCTGAGCCGTGCCAG < 2:177022/150‑1 CGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5212348‑5212189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAG > NC_002947/5212280‑5212425 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |