New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 401360 = | 12 (0.720) | 11 (0.730) | 3/260 | 1.7 | 55.1% | coding (943/1059 nt) | PP_0334 | transposase |
? | NC_002947 | 3970871 = | 7 (0.460) | coding (1033/1179 nt) | PP_3498 | transposase |
GGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAC > NC_002947/3970756‑3971018 | agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:270368‑M2/35‑1 (MQ=255) cgcctccggttgttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctccTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggct < 2:63958‑M2/47‑1 (MQ=255) gtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagattccgatcagccagatgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGAtt < 2:158329‑M2/69‑1 (MQ=255) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGt > 2:247537/1‑150 (MQ=32) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:179364‑M2/35‑1 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:371928‑M2/66‑100 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:179365‑M2/66‑100 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:179364‑M2/66‑100 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:179361‑M2/66‑100 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:371928‑M2/35‑1 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:179365‑M2/35‑1 (MQ=255) tgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:179361‑M2/35‑1 (MQ=255) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTAc > 2:177736/1‑150 (MQ=32) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTAc > 1:283936/1‑150 (MQ=32) tCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAg > 2:66647/1‑150 (MQ=32) gCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg > 1:79903/1‑147 (MQ=32) gCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg < 2:79903/147‑1 (MQ=32) aGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAgg > 1:276485/1‑150 (MQ=32) atcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGa < 2:181254‑M2/139‑1 (MQ=255) tcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc > 2:311169‑M2/3‑150 (MQ=255) | GGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAC > NC_002947/3970756‑3971018 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |