| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5562693 = | 280 (1.020) | 17 (0.070) | 12/262 | NT | 6.5% | intergenic (‑224/+78) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | 5562757 = | 223 (0.850) | intergenic (‑288/+14) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase | |||||
TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5562848‑5562693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaaaTCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCTGGCT > NC_002947/5562757‑5562905 TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA > 1:1046096/1‑150TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 1:8951200/150‑1TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA > 2:2782554/1‑150TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 2:2870017/150‑1TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 2:492999/150‑1TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA > 1:4002346/1‑150TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 2:7754618/150‑1TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 1:1974239/150‑1TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 1:1973518/150‑1 TCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAATAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT < 2:3228310/150‑1 TCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT < 2:8080190/150‑1 TCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT > 2:8196613/1‑150 TCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT > 2:8196628/1‑150 TCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGA > 2:6335296/1‑150 TCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGA > 2:6004034/1‑150 TCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGA > 2:1010808/1‑150 CGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAA > 2:4672651/1‑150 AGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAA < 1:1191470/150‑1 AGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAA < 1:3632160/150‑1 AGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTGCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAA < 2:3523132/150‑1 AAGCGCGACGTGATGGGCCGGGACCCGAACAACGAATTCTTCCGTTACCTGGACAAGAGCCGACCGTGATGCTCAGGCCATGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAG < 2:2709170/150‑1 AGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAATCAGGG < 1:3504261/150‑1 CTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCT > 1:9124417/1‑150 CTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCT > 1:9124983/1‑150 GATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTG > 1:2451519/1‑150 TCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGA > 1:8083242/1‑150 ATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGA > 2:3975927/1‑150 GCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGACGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCGCTTGCTCGAGACGCTCTCGC > 2:8103494/1‑150 GCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGC > 2:3961880/1‑150 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGG > 1:7059694/1‑150 CCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGT > 1:7775133/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTA > 2:2573373/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTA > 2:7880710/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTA > 2:7880626/1‑150 CCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTAT > 2:532221/1‑150 CCGCCTGGCAGCTAATGCACCAGGCGGGGCGCATCCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCAC > 1:7014848/1‑120 CCGCCTGGCAGCTAATGCACCAGGCGGGGCGCATCCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCAC < 2:7014848/120‑1 CGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑CGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATG > 1:127304/1‑150 ATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTC > 1:6495409/1‑150 ATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTC < 1:1379466/150‑1 ATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTC > 2:5299919/1‑150 TGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCC > 1:4698322/1‑150 TGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCC > 2:2970819/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT < 2:2113045/150‑1 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT > 2:1644715/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT > 1:2835399/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT > 2:4268412/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT > 1:7049300/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCT > 2:8182676/1‑150 GAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGAGTCCT > 1:7454879/1‑150 AATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCTGGC < 1:5174146/150‑1 ATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCTGGCT < 1:6642863/150‑1 TTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5562848‑5562693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaaaTCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAAATCAGCGTCCTGGCT > NC_002947/5562757‑5562905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |