New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2080205 =191 (0.690)15 (0.060) 11/242 NT 9.2% intergenic (+25/+90) PP_1853/PP_1854 LysR family transcriptional regulator/hypothetical protein
?NC_002947 2080286 = 130 (0.540)intergenic (+106/+9) PP_1853/PP_1854 LysR family transcriptional regulator/hypothetical protein

Only 100 of 259 total aligned reads displayed.

TCAGCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATC  >  NC_002947/2080056‑2080348
                                                                                                                                                     |                                                                                                                                                
ggttgaagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctct                                                                                                                                                  >  1:8975345‑M1/150‑150 (MQ=255)
 gttgaagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctctt                                                                                                                                                 <  1:7294004‑M1/2‑1 (MQ=255)
  ttgaagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTc                                                                                                                                                <  1:3638858‑M1/3‑1 (MQ=255)
  aGCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTc                                                                                                                                                <  1:3868889/150‑1 (MQ=255)
   gCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTcg                                                                                                                                               <  1:3152132/150‑1 (MQ=255)
    gaagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcgc                                                                                                                                              >  1:3540206‑M1/146‑150 (MQ=255)
    gaagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcgc                                                                                                                                              >  1:1533996‑M1/146‑150 (MQ=255)
    ccTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTcgc                                                                                                                                              >  2:284715/1‑150 (MQ=255)
     aagattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcgcg                                                                                                                                             <  2:6790259‑M1/6‑1 (MQ=255)
      agattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCgg                                                                                                                                            >  1:7049407‑M1/144‑150 (MQ=255)
      agattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCgg                                                                                                                                            >  2:3664143‑M1/144‑150 (MQ=255)
      agattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCgg                                                                                                                                            >  2:204216‑M1/144‑150 (MQ=255)
       gattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcgc                                                                                                                                              >  1:2305298‑M1/143‑147 (MQ=255)
       gattggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcgc                                                                                                                                              <  2:2305298‑M1/5‑1 (MQ=255)
         ttggcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGgcc                                                                                                                                         <  2:4598024‑M1/10‑1 (MQ=255)
          tttCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGgccc                                                                                                                                        <  1:8490603/150‑1 (MQ=255)
          tggggagggtgacgggctggtgacggtgattaccccacgatctcctctgggggagcatctgctgggcttgcgggtggatgtcgatgtgcacctgggcgcacaggtttcgttcattgtcgatgttgtctgaaccggcctcTTCGCtggcgg                                                                                                                                        >  2:1838691‑M1/140‑148 (MQ=255)
            gcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGgcccgc                                                                                                                                      <  2:6286635‑M1/13‑1 (MQ=255)
            gcgagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGgcccgc                                                                                                                                      <  1:6432836‑M1/13‑1 (MQ=255)
              gagggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGgcccgccc                                                                                                                                    >  1:8862405‑M1/136‑150 (MQ=255)
              gCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGTCTGAACCGGCCTCTTCGCGGgcccgccc                                                                                                                                    >  2:5986428/1‑150 (MQ=255)
               ccGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCCTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGggccccccc                                                                                                                                   >  1:2574231/1‑149 (MQ=255)
               ccGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGcccgcccg                                                                                                                                   >  1:7181279/1‑150 (MQ=255)
                gggtgacgggctggtgacggtgattaccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGGCccgcccgc                                                                                                                                  <  1:6816288‑M1/17‑1 (MQ=255)
                 gAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCa                                                                                                                                 >  2:5612260/1‑150 (MQ=255)
                 gAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCGTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCccgcccgcc                                                                                                                                 >  2:6929491/1‑149 (MQ=255)
                 gAGCACAAGCTGGTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTGTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCa                                                                                                                                 <  2:4665212/150‑1 (MQ=255)
                       aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCccccccccccc                                                                                                                           >  1:7995928/1‑147 (MQ=255)
                           tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCTGCCCGCACCCACAGGGa                                                                                                                       >  2:7949743/1‑150 (MQ=255)
                           tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa                                                                                                                       >  2:4343041/1‑150 (MQ=255)
                           tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGGTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCccccccccccccggc                                                                                                                       >  1:897266/1‑143 (MQ=255)
                           tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTGTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa                                                                                                                       >  2:5059699/1‑150 (MQ=255)
                             ttGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTTCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCCCCCACAggggtt                                                                                                                     >  1:5649801/1‑147 (MQ=255)
                               gCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCCCCCACAGGGATATc                                                                                                                   >  2:3059970/1‑150 (MQ=255)
                                  gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca                                                                                                                <  1:6786589/150‑1 (MQ=255)
                                     cAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGcc                                                                                                             <  1:7503440/150‑1 (MQ=255)
                                      aaGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGccc                                                                                                            >  2:3982242/1‑150 (MQ=255)
                                      aaGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGccc                                                                                                            <  2:380257/150‑1 (MQ=255)
                                       aGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCt                                                                                                           <  2:8602069/150‑1 (MQ=255)
                                       aGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCt                                                                                                           <  1:3213842/150‑1 (MQ=255)
                                         aCCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCATGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGa                                                                                                         <  2:2856921/150‑1 (MQ=255)
                                         aCCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGa                                                                                                         <  2:8750557/150‑1 (MQ=255)
                                         aCCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGa                                                                                                         <  1:6568166/150‑1 (MQ=255)
                                          ccccacgatcgccgctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                        >  1:6714095‑M1/108‑150 (MQ=255)
                                          cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                        <  2:634825/150‑1 (MQ=255)
                                          cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                        <  2:1093359/150‑1 (MQ=255)
                                            cGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGa                                                                                                      <  1:5246039/150‑1 (MQ=255)
                                                 gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                <  1:8574759/150‑1 (MQ=255)
                                                   tCATCGAGTTTGTGGGGGAGCAGTGTGCCGAGCAGGGGCTGGCGGGGCGGTTCGAGGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                              <  2:142294/150‑1 (MQ=255)
                                                     aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGgcccgcc                                                                                                                                     <  2:2260760/110‑1 (MQ=255)
                                                     aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGt                                                                                            >  2:7294004/1‑150 (MQ=255)
                                                     aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACACGGATATCACAGCCCAGAAAACAGTGGGGt                                                                                            >  1:7221875/1‑150 (MQ=255)
                                                     aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCCCCCCCCCCCACACGGATATAAAACCCCAGAATACACGTgggt                                                                                             >  1:7109723/1‑149 (MQ=255)
                                                       gctggggcagcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTcg                                                                                                                                               >  1:6284243‑M1/95‑98 (MQ=255)
                                                       cGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTcc                                                                                          <  1:4114979/150‑1 (MQ=255)
                                                          ttttGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCACCCCCAGGGATATAAAAACCCAGAAGACAGTGGGGTGCtag                                                                                       >  1:6211183/1‑148 (MQ=255)
                                                             tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGACTTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                    <  1:551140/150‑1 (MQ=255)
                                                             tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                    <  2:6055965/150‑1 (MQ=255)
                                                             tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                    <  2:1534164/150‑1 (MQ=255)
                                                                   ggAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgg                                                                              <  2:2540189/150‑1 (MQ=255)
                                                                   actgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggccttTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgg                                                                              >  1:936437‑M1/83‑150 (MQ=255)
                                                                   actgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgg                                                                              >  2:819267‑M1/83‑150 (MQ=255)
                                                                    gAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                >  1:1864954/1‑131 (MQ=255)
                                                                    gAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGa                                                                                  >  2:8321478/1‑145 (MQ=255)
                                                                    gAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcg                                                                               >  1:4553225/1‑148 (MQ=255)
                                                                       ctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                          >  1:2031260‑M1/79‑150 (MQ=255)
                                                                        tgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc                                                                            >  2:8586212‑M1/78‑147 (MQ=255)
                                                                         gTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGAGATCACAGCCCGGAAGAAAGGGGGGTCCGTGTGGgggcgggcgggc                                                                        >  1:3170324/1‑150 (MQ=255)
                                                                          tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGGCCGCCCCCCCCCCCCGGGGTATCAACGCCCTGCAGACAGTGGGGGGCGTGTGGGTGCGGGGGGGcc                                                                       >  1:1017314/1‑150 (MQ=255)
                                                                          tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGTGCGGGCGGGcc                                                                       >  2:2115065/1‑150 (MQ=255)
                                                                          tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCCCCCCCAGGGATATGACAGCCCGGAAAACCGTGGGGTCCGTGTGGGAGcgggcggggc                                                                       >  1:1017664/1‑148 (MQ=255)
                                                                             gCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCcgc                                                                    <  2:6264146/150‑1 (MQ=255)
                                                                               cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCGTGTGGGAGCGGGCGGGCCCGCGa                                                                  >  2:8249784/1‑150 (MQ=255)
                                                                                gtgctggggCTGGGGGGGCGGTTCGATGCCCTGCTGGCCCTTTATATATTTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGTTATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGaa                                                                 <  2:4936913/145‑1 (MQ=255)
                                                                                gcgCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGATATCACAGCCCTGAAGACCGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGaa                                                                 <  2:7624978/148‑1 (MQ=255)
                                                                                gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcg                                                                           >  2:5801931/1‑140 (MQ=255)
                                                                                gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcg                                                                           <  1:5801931/140‑1 (MQ=255)
                                                                                  gctggggCTGGGGGGGCGGTTCGTTGCCGTGCAGGCCCTTTTGAGATTTTTTGCCTGTGCCGCCATTTTCGCGGGCCCGCCCGCACCCACTGGTATATCACAGCCCTTATGACAGGGGGTTCCTTGTGGGAGCGGGCGGGCCCGCGAaga                                                               <  2:392054/147‑1 (MQ=255)
                                                                                  gccggggCTGGCGGGGGGGTTCGCGGCCCGGCTGGCCCTTTAGAGAAGTATGGCCTGTGCCGGCCTTGGCGCGGGCCCGCCCGCACCCACCGGGATATCCCCGCCCTGAAGACAGTGGGGTCCTTGTGGGAGGGGGCGGGCCCGCGAaga                                                               <  2:4762887/147‑1 (MQ=255)
                                                                                   cAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGGTATCACCGCCCGGAAGACCCGGGGGGGCTGGGGGGGGCGGGCGGGGCcgcggcggg                                                              >  1:8638242/1‑145 (MQ=255)
                                                                                        gCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCGGGATATCACAGCCCAGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGCGGCCgg                                                         >  2:3602376/1‑150 (MQ=255)
                                                                                        gCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                          >  2:9133124/1‑133 (MQ=255)
                                                                                        gCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                          <  1:9133124/133‑1 (MQ=255)
                                                                                              ggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaccggcctcTTCGCggg                                                                                                                                           >  1:8208737‑M1/56‑63 (MQ=255)
                                                                                              ggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGGCCGCCCGCCCCCCCCGGGCTAAAACACCCCAGCAGAAAGTGGGGTGCTTGGGGGAGCGGGCGGGCCCGCGCAGAGGCCGGGTgaga                                                   >  1:1671432/1‑150 (MQ=255)
                                                                                                   ggTTCGATGCCCTGCTGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGacaaca                                              <  2:8841145/150‑1 (MQ=255)
                                                                                                      tCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCg                                           >  2:7601718/1‑150 (MQ=255)
                                                                                                       cGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCCGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGCATATCCCCGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGa                                          <  2:327892/150‑1 (MQ=255)
                                                                                                        gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGAc                                         <  2:7477828/150‑1 (MQ=255)
                                                                                                         aTGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCCGGGATATCACAGCCCAGAAGACACAGGGGGCCGTGTGGGAGCGGGCGGGCCCGCCGAGCCGCCGGGGCAGacaaccaacacc                                        >  1:8117815/1‑143 (MQ=255)
                                                                                                                 cAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATAACACAGCCCTGAAGACAGTGGGGTCCTTGGGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGa                                <  2:7181279/150‑1 (MQ=255)
                                                                                                                        tttAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCAGTGGGGGAGCGGGCGGGCCCGCGCAGAGGCCGGTTCAGACAACATCGACAAAGAACGATACCtgt                         >  2:6481787/1‑150 (MQ=255)
                                                                                                                            gagaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTgcgc                     >  2:8136694/1‑150 (MQ=255)
                                                                                                                             agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGCTAACACAGCCCGGAAGACAGTGGGGTCCGTGTGGGGGCGGGCGGGCCCGCGACCAGGCCGGGTCCGACCACAAGGCCCAAGAACGGTACCGGTGCGcc                    >  1:2850125/1‑150 (MQ=255)
                                                                                                                             agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGATATCACACCCCAGAAGACAGTGGGGTCCGTGTGGGCGCGGGCGGGCCCGCGGAGAGGCCCGTTCAGACAACAACGACAAAGAAACATACCAGTGCGcc                    >  2:3113998/1‑150 (MQ=255)
                                                                                                                             agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGGGTCCTGGTGGGGGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACCATGAACGATACCTGGGCGcc                    >  2:7043394/1‑150 (MQ=255)
                                                                                                                                     ggCCTGGGCCGGCCTTTCGGGGGGCCCCCCCGCCCCCACCGGGATACCCCCGCCGTCACCCCTGGGGGGGCGTTGTGGGTGGGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCa            <  1:4810934/149‑1 (MQ=255)
                                                                                                                                      gCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCGGGATATCACCGCCCTGAAGACCGTGGGGTCCTTGTGGGCGCGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCAc           <  1:3785279/150‑1 (MQ=255)
                                                                                                                                      gCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCAACAGGTATATCACAGCCCTGAAGACAGTGGGTTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCAc           <  2:8083089/150‑1 (MQ=255)
                                                                                                                                            gCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGTTTATCACAGCCCTGATGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTc     <  2:4158736/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
TCAGCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATC  >  NC_002947/2080056‑2080348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.