New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2579078 =232 (0.840)13 (0.050) 9/276 NT 5.4% coding (1282/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator
?NC_002947 2579150 = 226 (0.820)coding (1210/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator

Only 100 of 265 total aligned reads displayed.

CCGGTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGC  >  NC_002947/2578929‑2579225
                                                                                                                                                     |                                                                                                                                                    
ccGGTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTc                                                                                                                                                      <  2:1020447/150‑1 (MQ=255)
 cGGTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCg                                                                                                                                                     >  2:3022216/1‑150 (MQ=255)
  ggTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGc                                                                                                                                                    <  2:4497234/150‑1 (MQ=255)
   gTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGcc                                                                                                                                                   >  1:8417842/1‑150 (MQ=255)
     cAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCAc                                                                                                                                                 <  2:5496715/150‑1 (MQ=255)
      aGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACt                                                                                                                                                <  2:9031052/150‑1 (MQ=255)
       gcgcGTTCGCGCAGGGGGGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTg                                                                                                                                               <  2:5206190/150‑1 (MQ=255)
        cgcgTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGc                                                                                                                                              <  2:8553651/150‑1 (MQ=255)
           gTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCa                                                                                                                                           >  1:6059801/1‑150 (MQ=255)
                cgcAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGc                                                                                                                                      <  2:7723532/150‑1 (MQ=255)
                    ggggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCTGTTCGCCACTGCCCAGCTGCTGGa                                                                                                                                  <  1:6585736/150‑1 (MQ=255)
                    ggggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGa                                                                                                                                  <  1:4908436/150‑1 (MQ=255)
                     gggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAt                                                                                                                                 >  2:2567103/1‑150 (MQ=255)
                      ggAGGCAGCACCAGCTTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtg                                                                                                                                <  2:8890497/150‑1 (MQ=255)
                      ggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtg                                                                                                                                <  2:1287185/150‑1 (MQ=255)
                            agcaCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTgcgc                                                                                                                          <  1:5409906/150‑1 (MQ=255)
                              caCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑a                                                                                                                       <  2:765001/150‑1 (MQ=255)
                               aCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑Ac                                                                                                                      >  1:3287544/1‑150 (MQ=255)
                               aCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑Ac                                                                                                                      >  2:758718/1‑150 (MQ=255)
                                 cAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTg                                                                                                                    <  1:4303606/150‑1 (MQ=255)
                                  aGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGc                                                                                                                   >  2:7636315/1‑150 (MQ=255)
                                   gCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGTGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCa                                                                                                                  <  1:896130/150‑1 (MQ=255)
                                          gCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTAcgcg                                                                                                           >  2:5074829/1‑150 (MQ=255)
                                          gCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGAGATTGCTCGCAGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCACAGCGGCTGGATGCTGCGCG‑ACTGCAGAAcgcg                                                                                                           >  1:5343040/1‑150 (MQ=255)
                                           ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGc                                                                                                                                                    >  1:8353486/1‑109 (MQ=255)
                                           ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGc                                                                                                                                                    <  2:8353486/109‑1 (MQ=255)
                                           ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACgcgc                                                                                                          <  1:686815/150‑1 (MQ=255)
                                            tcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaaggccgaccacggcatcctgtttctggatgagattggcgacaTGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCgca                                                                                                         >  1:5267869‑M1/106‑150 (MQ=255)
                                            cGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCgca                                                                                                         >  2:4380586/1‑150 (MQ=255)
                                             ggCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCgcag                                                                                                        <  1:7114145/150‑1 (MQ=255)
                                              gCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTTCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGTACTGCAGT‑CGCgcagc                                                                                                       <  2:2737327/150‑1 (MQ=255)
                                              gCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCgcagc                                                                                                       <  1:9077212/150‑1 (MQ=255)
                                              gCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCgcagc                                                                                                       <  1:3960634/150‑1 (MQ=255)
                                                     ggTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCggg                                                                                                >  2:6096128/1‑150 (MQ=255)
                                                     ggTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCggg                                                                                                >  2:4506726/1‑150 (MQ=255)
                                                         gtaCAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtg                                                                                            >  2:6803978/1‑150 (MQ=255)
                                                          taCAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtgg                                                                                           <  2:5980248/150‑1 (MQ=255)
                                                             aGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtgggtg                                                                                        <  2:8611950/150‑1 (MQ=255)
                                                             aGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtgggtg                                                                                        <  2:7888031/150‑1 (MQ=255)
                                                               gTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACgcgc                                                                                                          <  1:7702387/130‑1 (MQ=255)
                                                                tCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGc                                                                                     >  2:6233777/1‑150 (MQ=255)
                                                                tCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGc                                                                                     >  2:8832466/1‑150 (MQ=255)
                                                                tCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGc                                                                                     >  2:7407269/1‑150 (MQ=255)
                                                                  cTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAg                                                                                   >  1:6249989/1‑150 (MQ=255)
                                                                   tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑a                                                                                                                       <  1:3776517/113‑1 (MQ=255)
                                                                   tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑a                                                                                                                       >  2:3776517/1‑113 (MQ=255)
                                                                   tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGt                                                                                  >  2:4390353/1‑150 (MQ=255)
                                                                    ggCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTg                                                                                 <  1:519676/150‑1 (MQ=255)
                                                                    ggCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTg                                                                                 >  1:5907611/1‑150 (MQ=255)
                                                                          aGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCt                                                                                             >  2:8044669/1‑132 (MQ=255)
                                                                          aGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCt                                                                                             <  1:1449922/132‑1 (MQ=255)
                                                                          aGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCt                                                                                             >  2:6052556/1‑132 (MQ=255)
                                                                            cgcCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCg                                                                         <  1:3022216/150‑1 (MQ=255)
                                                                             gcCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGc                                                                        <  1:5613412/150‑1 (MQ=255)
                                                                              cccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGTACTGCAGT‑CGCgcagc                                                                                                       >  1:1589112/1‑118 (MQ=255)
                                                                               ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCa                                                                      <  2:5916768/150‑1 (MQ=255)
                                                                                  gcgcgcACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAtc                                                                   <  1:1160167/150‑1 (MQ=255)
                                                                                  gcgcgcACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAtc                                                                   <  2:278019/150‑1 (MQ=255)
                                                                                       cACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTGCGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATc                                                              <  2:7023156/150‑1 (MQ=255)
                                                                                        aCTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATca                                                             >  1:3405542/1‑149 (MQ=255)
                                                                                          ttCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAg                                                           >  1:3177163/1‑150 (MQ=255)
                                                                                              tcgGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAAc                                                       >  1:1982648/1‑150 (MQ=255)
                                                                                               cgGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACa                                                      >  2:1520578/1‑150 (MQ=255)
                                                                                                      gTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGcc                                               <  1:7297150/150‑1 (MQ=255)
                                                                                                      ccgcaaggccgaccacggcatcctgtttctggatgagattggcgacaCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtgggtggg                                                                                      >  1:556026‑M1/48‑111 (MQ=255)
                                                                                                      ccgcaaggccgaccacggcatcctgtttctggatgagattggcgacaCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCtgggtggg                                                                                      <  2:556026‑M1/64‑1 (MQ=255)
                                                                                                        tGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGt                                             <  1:2671179/150‑1 (MQ=255)
                                                                                                            agtGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTc                                         <  2:7927725/148‑1 (MQ=255)
                                                                                                             ttGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCg                                        <  2:3177163/150‑1 (MQ=255)
                                                                                                              tGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCgg                                       <  1:5843589/150‑1 (MQ=255)
                                                                                                                 tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                    >  1:8021953/1‑150 (MQ=255)
                                                                                                                 tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                    >  1:343144/1‑150 (MQ=255)
                                                                                                                 tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                    >  2:1896203/1‑150 (MQ=255)
                                                                                                                   gCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTg                                  <  1:8321039/150‑1 (MQ=255)
                                                                                                                    ccGACACCCCGCGGATATCCACCGGCACCGTTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGc                                 <  1:2047203/150‑1 (MQ=255)
                                                                                                                    ccGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGc                                 <  1:6507771/150‑1 (MQ=255)
                                                                                                                    ccGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGc                                 <  1:4795321/150‑1 (MQ=255)
                                                                                                                       acacCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGa                              <  2:3287544/150‑1 (MQ=255)
                                                                                                                       acacCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGa                              <  1:8124016/150‑1 (MQ=255)
                                                                                                                       acacCACGCGGATATCCACCGGCACCGGGTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGa                              <  2:4290299/150‑1 (MQ=255)
                                                                                                                          ccacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCa                           <  1:1762663/150‑1 (MQ=255)
                                                                                                                           cacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAg                          >  1:239153/1‑150 (MQ=255)
                                                                                                                           cacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAg                          >  1:8883810/1‑150 (MQ=255)
                                                                                                                            acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                         >  1:2861462/1‑150 (MQ=255)
                                                                                                                            acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                         >  2:1210940/1‑150 (MQ=255)
                                                                                                                            acGCGGATATCCACCGACACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                         >  2:6288831/1‑150 (MQ=255)
                                                                                                                              gcgGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTcc                       >  1:2601319/1‑150 (MQ=255)
                                                                                                                                 gATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                    <  1:4155944/150‑1 (MQ=255)
                                                                                                                                    atCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGtt                 <  1:9157054/150‑1 (MQ=255)
                                                                                                                                        accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCCGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGACCCGGGTTGccc             >  1:5494463/1‑150 (MQ=255)
                                                                                                                                         ccggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCa                                                                >  2:8769397/1‑98 (MQ=255)
                                                                                                                                         ccggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCa                                                                <  1:8769397/98‑1 (MQ=255)
                                                                                                                                          cggcaccggTTCGCCACGGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCtt           <  2:8224135/150‑1 (MQ=255)
                                                                                                                                              accggTTCGCCACGGCCCAGCGGCTGGATGCTGCGCG‑ACGGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGGGGCCCTTgtgg       <  1:1050772/150‑1 (MQ=255)
                                                                                                                                               ccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggt      <  2:5852161/150‑1 (MQ=255)
                                                                                                                                                cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggtg     <  2:2097382/150‑1 (MQ=255)
                                                                                                                                                cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggtg     <  2:3403413/150‑1 (MQ=255)
                                                                                                                                                cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggtg     <  2:4733928/150‑1 (MQ=255)
                                                                                                                                                 gacaTGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg    <  2:180632‑M1/146‑1 (MQ=255)
                                                                                                                                                   ttCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGTAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGgc  <  1:5962635/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CCGGTCAGCGCGTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCG‑ACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGC  >  NC_002947/2578929‑2579225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.