New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	209888 =	NA (NA)	10 (0.040)	4/272	NT	100%	coding (15394/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209911 =	0 (0.000)					coding (15417/26049 nt)	PP_0168	putative surface adhesion protein

GGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGAC  >  NC_002947/209762‑210037                                                                                                                                                      |                                                                                                                               tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                >  1:2711423‑M2/150‑150 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:8828157‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:8682809‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:7410525‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  1:6282392‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:4698317‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:2791258‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:1530725‑M2/1‑1 (MQ=255) tcgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggc                                                                                                                                <  2:1951088‑M2/1‑1 (MQ=255)  cgtgggccagcggctggttgacgtgcacggtgaaggtcggcttgacgttctcggccaccgaggtctggtcggcggtgatggtgaccttgaccaagtcgccttcgttgcccggcgtacctggctcgtcggtcaccgacgtgctgaccggCg                                                                                                                               >  2:2062642‑M2/149‑150 (MQ=255)                                                                                                                         ggctcgtcggtcaccgacgtgctgaccggCGAGCCGGGTACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCAcggccg                                                                         >  1:8741327‑M2/30‑85 (MQ=255)                                                                                                                         ggctcgtcggtcaccgacgtgctgaccggCGAGCCGGGTACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCAcggccg                                                                         <  2:8741327‑M2/56‑1 (MQ=255)                                                                                                                            tcgtcggtcaccgacgtgctgaccggCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAgg                                                                                        >  1:1338757‑M2/27‑67 (MQ=255)                                                                                                                            tcgtcggtcaccgacgtgctgaccggCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAgg                                                                                        <  2:1338757‑M2/41‑1 (MQ=255)                                                                                                                            tcgtcggtcaccgacgtgctgaccggCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCAc     >  1:453445‑M2/27‑150 (MQ=255)                                                                                                                            tcgtcggtcaccgacgtgctgaccggCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCAc     >  1:3425724‑M2/27‑150 (MQ=255)                                                                                                                            tcgtcggtaaccgacgtgctgaccggCGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCAc     >  2:8945789‑M2/27‑150 (MQ=255)                                                                                                                              gtcggtcaccgacgtgctgaccgaCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGa   >  1:4717093‑M2/25‑150 (MQ=255)                                                                                                                               tcggtcaccgacgtgctgaccgaCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGAc  >  2:7266302‑M2/24‑150 (MQ=255)                                                                                                                               tcggtcaccgacgtgctgaccgaCGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGAc  >  2:7266321‑M2/24‑150 (MQ=255)                                                                                                                                                      |                                                                                                                               GGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGAC  >  NC_002947/209762‑210037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.