| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 1,843,225 | (TGGCGCGCCAGTTCG)1→2 | 87.7% | coding (1611/2754 nt) | gacS ← | sensor protein GacS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1843211 = | 2 (0.110) | 14 (0.810) | 12/236 | NT | 87.7% | coding (1625/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | = 1843225 | 2 (0.120) | coding (1611/2754 nt) | gacS | sensor protein GacS | |||||
TCAACCTGCCCAAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1843310‑1843211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaCGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGACCAGTTGCTGCAGGGGGTGCAGGCCGCC < NC_002947/1843225‑1843123 TCAACCTGCCCAAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCCCCCACAGGCGCGCCCGGCACAGGAGCACCCGCAGGA > 1:221088/1‑136TCAACCTGCCCAAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGA > 1:238578/1‑136 cCCCACGGCTCATGACGAGGCCGACGCGCTCCCACCGCAGCAATTGCGGGGCCGCCGTGCCGCCATTGTCGATGCCCACCAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGC < 2:145123/135‑1 AAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCCCGAACTGGCGCGCCCGGCACGGGGGCCCCAGCGGGAAGACTGCGGCC > 2:4558/1‑136 AAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCC > 2:555223/1‑136 TCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACAGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGC > 2:266769/1‑136 ACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCCCGAACAGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAG > 1:159917/1‑136 CGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGC > 2:105964/1‑136 CCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCCCCCCACCAACATGCGCGCCACGCACAGGAGCACCAGCTGGAAAACTGCGGCCGCAGCGTGAGCCAGTT > 1:94112/1‑136 ACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGAC > 2:49364/1‑136 CCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGACCAGTTGCTGCAGGGGGTG > 1:237979/1‑136 TGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCACGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGACCAGTTGCTGCAGGGGGTGCAGGCC > 1:128645/1‑136 CGCCTTTGTCGCTCCCCACGACCGGGCGCCCCACGAACTGCCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGACCAGTTGCTGCAGGGGGTGCAGGCCGCC < 2:263277/136‑1 CGCCATTGTCGATGGCCACGAACTGGCGCCCCACGCACTGGCGCGCCAGGCACTGGAGCACCCGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGGTCGCCACCGACGCCCAGTTGCTGCAGGGGGTGGCGGCCCCC > 1:237081/1‑136 TCAACCTGCCCAAGGCTCATGACGATGCCGAAGCGCTGCCACCGCAGCCATTGCTGGGCCGCCGTGCCGCCATTGTCGATGGCCACGAACTGGCGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1843310‑1843211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaCGAACTGGCGCGCCAGGCACTGGAGCACCAGCTGGAAGACTGCGGCCTCAGCGTGAGCCTGTTCGCCTCCTACGACCAGTTGCTGCAGGGGGTGCAGGCCGCC < NC_002947/1843225‑1843123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |