Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5258594	5258604	11	2 [1]	[1] 2	PP_5703	type III effector protein HopJ

TTCGAAAAAGGAAAACCTCGTGACTGACCTGAATACCCTGCGCGCAAGCCTGGCCAGCGGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCG  >  NC_002947/5258458‑5258597                                                                                                                                        |     ttCGAAAAAGGAAAACCTCGTGACTGACCTGAATACCCTGCGCGCAAGCCTGGCCAGCGGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAAcggc      >  2:126972/1‑136 (MQ=255)     aaaaaGGAAAACCTCGTGACTGACCTGAATACCCTGCGCGCAAGCCTGGCCAGCGGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGgcggcg  <  2:395915/136‑1 (MQ=255)                                                                                                                                        |     TTCGAAAAAGGAAAACCTCGTGACTGACCTGAATACCCTGCGCGCAAGCCTGGCCAGCGGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCG  >  NC_002947/5258458‑5258597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑