| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 699484 = | 6 (0.360) | 3 (0.220) | 3/210 | 1.1 | 26.4% | noncoding (51/77 nt) | PP_t05 | tRNA‑Ile |
| ? | NC_002947 | 5312903 = | 12 (0.900) | intergenic (‑34/+63) | PP_t51/PP_t50 | tRNA‑Ala/tRNA‑Ile | |||||
ATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTC > NC_002947/699349‑699605 | aTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCgg > 2:197142/1‑136 (MQ=32)aTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCgg > 2:286021/1‑136 (MQ=32) gacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTc > 2:304787/1‑136 (MQ=32) gacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTc > 2:80867/1‑136 (MQ=32) aTCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCaaa > 2:330064/1‑136 (MQ=32) gaGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTa < 1:70719/136‑1 (MQ=32) acccctgataagggtgaggtcggcagttcaaatctgcccagacctaccaattttggttggaatgttgagcaccccatgcctctggataaagagtggtgaggacggctcttctGCAGTTCAAATCTGCCCAGACCTa > 1:87173‑M1/113‑136 (MQ=255) agacctaccaattttggttggaatgttgagcaccccatgcctctggataaagagtggtgaggacggctcttctGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCt < 1:331321‑M1/63‑1 (MQ=255) atgttgagcaccccatgcctctggataaagagtggtgaggacggctcttctGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCtt < 1:287114‑M1/85‑1 (MQ=255) aggacggctcttctGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTc > 2:287114‑M1/15‑136 (MQ=255) | ATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTC > NC_002947/699349‑699605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |