New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	699484 =	6 (0.360)	3 (0.220)	3/210	1.1	26.4%	noncoding (51/77 nt)	PP_t05	tRNA‑Ile
	?	NC_002947	5312903 =	12 (0.900)					intergenic (‑34/+63)	PP_t51/PP_t50	tRNA‑Ala/tRNA‑Ile

TTGATCAAGGTAAAGCAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGT  >  NC_002947/5312775‑5313014                                                                                                                                 |                                                                                                                ttGATCAAGGTAAAGCAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGc                                                                                                          <  1:307230/136‑1 (MQ=255)       gagccaagcgggatcgaaccgctgacctcctgcgtgcaaggcaggcgctctcccagctgagctatggccccgtattctacggctgaaccatgtaatggtaggtctgggcagatttgaactgcAGAAGAGCCGTCCt                                                                                                    >  2:287114‑M2/123‑136 (MQ=255)        aGGTAAAGCAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTc                                                                                                   <  1:123212/136‑1 (MQ=255)        aGGTAAAGCAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTc                                                                                                   <  1:38374/136‑1 (MQ=255)                    tggtggAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCTCTCTCCCAGCTTAGCTATGGCCCCGCATATTGTTATGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTAt                                                                                       <  1:315979/136‑1 (MQ=255)                    tggtggAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTAt                                                                                       <  1:258571/136‑1 (MQ=255)                    tggtggAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTAt                                                                                       <  2:248989/136‑1 (MQ=255)                                            aaggcaggcgctctcccagctgagctatggccccgtattctacggctgaaccatgtaatggtaggtctgggcagatttgaactgcAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACAt                                                               <  1:287114‑M2/51‑1 (MQ=255)                                                        gCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTTGGTCTGGGCATATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAAt                                                   <  1:94439/136‑1 (MQ=255)                                                              aaGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGGCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAg                                             >  1:124342/1‑136 (MQ=255)                                                                  caggcGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCt                                         <  1:321256/136‑1 (MQ=255)                                                                  agctatggccccgtattctacggctgaaccatgtaatggtaggtctgggcagatttgaactgcAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCt                                         <  1:331321‑M2/73‑1 (MQ=255)                                                                         gctcCCAGCTGAGCTATGGCCCCGCATTTTGGTAGGTCTGGGCAGATTTGATCTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGa                                  <  2:202906/135‑1 (MQ=255)                                                                         gctcCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGAATTGACCTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGa                                  <  2:365520/135‑1 (MQ=255)                                                                                               cGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCt            <  1:213183/136‑1 (MQ=255)                                                                                                         taggtctgggcagatttgaactgcAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGt  >  1:87173‑M2/25‑136 (MQ=255)                                                                                                                                 |                                                                                                                TTGATCAAGGTAAAGCAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCATATTGGTAGGTCTGGGCAGATTTGAACTGCAGAAGAGCCGTCCTCACCACTCTTTATCCAGAGGCATGGGGTGCTCAACATTCCAACCAAAATTGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGT  >  NC_002947/5312775‑5313014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.