| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_002947 | 3,827,335 | Δ51 bp | 100% | coding (626‑676/1020 nt) | ptxS ← | 2‑ketogluconate utilization repressor |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3827335 | 3827385 | 51 | 13 [0] | [0] 12 | ptxS | 2‑ketogluconate utilization repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3827334 | 0 (0.000) | 10 (1.100) | 7/230 | NT | 100% | coding (677/1020 nt) | ptxS | 2‑ketogluconate utilization repressor |
| ? | NC_002947 | 3827386 = | 0 (0.000) | coding (625/1020 nt) | ptxS | 2‑ketogluconate utilization repressor | |||||
TTGAAGGTGAAGATGGCTTGCGGACCATGACCACTGTGGGCAAGAAACGAAGCCAGTTGGCCCTGCAGCCCGGCGCCGATTTCCAGTACCTGCTGACGCATGCCTGGCCGTCGGCTGATCGACGCGCCGAATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAG > NC_002947/3827256‑3827509 | ttgcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCt < 2:67815‑M2/6‑1 (MQ=255)gtgcgcccggcctcgagcagcgcccgggtgaccgccaaggtggcaacgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCt < 2:276096‑M2/6‑1 (MQ=255) acgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCACTGa > 2:239372‑M2/86‑136 (MQ=255) acgccgttgaaggtgaagatggcttgcggaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCACTGa > 2:240775‑M2/86‑136 (MQ=255) gaccatgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGc > 1:231302‑M2/58‑136 (MQ=255) cttgacctctgtgggcaagaaaggaagcgagttggccctgcagcccggcgccgaATGCCTGCACGCGCTCCTGGCGTGTACTGGTGCGATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTg < 1:101523‑M2/82‑1 (MQ=255) ttgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGGCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGc < 2:140012‑M2/83‑1 (MQ=255) tgaccactgtgggcaagaaacgaagccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCa < 2:217561‑M2/84‑1 (MQ=255) gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCACTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg < 1:240775‑M2/108‑1 (MQ=255) gccagttggccctgcagcccggcgccgaATGCCTGCACCCGCTCCACGCGCGAACTTGTGCCATCGAGGGGTTCACTGACCGCCTGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTg < 1:239372‑M2/108‑1 (MQ=255) gcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAg > 1:49973‑M2/13‑136 (MQ=255) gcccggcgccgaATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGAAGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCGAGGGCCTGCTCGACTGCGGCAGCATTGTCCAg > 1:43204‑M2/13‑136 (MQ=255) | TTGAAGGTGAAGATGGCTTGCGGACCATGACCACTGTGGGCAAGAAACGAAGCCAGTTGGCCCTGCAGCCCGGCGCCGATTTCCAGTACCTGCTGACGCATGCCTGGCCGTCGGCTGATCGACGCGCCGAATGCCTGCACCCGCTCCAGGCGTGAACTGGTGCCATCGAGGGGTTCGCTGACCGCCAGGATGTCGCGGTAGCCCTGGGCTTGCAGGTGGTCCAGGGCCTGCTCGACTGCGTCAGCATTGTCCAG > NC_002947/3827256‑3827509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |