| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 699806 | 0 (0.000) | 5 (0.030) | 4/264 | NT | 17.2% | intergenic (+196/‑48) | PP_t06/PP_23SD | tRNA‑Ala/23S ribosomal RNA |
| ? | NC_002947 | 5312649 = | 48 (0.330) | intergenic (‑90/+145) | PP_23SG/PP_t51 | 23S ribosomal RNA/tRNA‑Ala | |||||
ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/699653‑699806‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattttACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGTGGT > NC_002947/5312649‑5312797 ATTCAGCTTGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAA < 1:3156006/150‑1ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAA > 2:2287490/1‑150ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAA > 2:2287468/1‑150ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAA > 2:4657339/1‑150ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAA < 1:3506432/150‑1 TTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAAT < 1:982866/150‑1 TCAGCGCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGACATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATT < 1:1969164/150‑1 AGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTT < 1:220202/150‑1 AGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTT > 1:1346007/1‑150 GGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTACCTTAGCC < 2:4976268/60‑1 GGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTACCTTAGCC > 1:4976268/1‑60 AAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTC > 2:130878/1‑150 GTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGAC > 2:3409587/1‑150 ATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGCCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGCCAGAAATCAACATTCGAgctgaa > 1:1144075/1‑144 TTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGT > 2:290476/1‑150 TTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGT < 2:3969174/150‑1 TTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGTG < 1:3291713/150‑1 TACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGTGGT < 2:1904643/150‑1 ATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/699653‑699806‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattttACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGTTCAGTCTATATCTATCACATATCCGAATTTTTAAAGAACGATCTGACAAAAGTCAGAAATCAACATTCGACGCGAATGCTCATTTCTGAGTTTGATCAAGGTAAAGCAAGTGGT > NC_002947/5312649‑5312797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |