New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2316776 | 138 (0.910) | 8 (0.050) | 5/274 | NT | 5.2% | coding (314/888 nt) | PP_2036 | 4‑hydroxy‑tetrahydrodipicolinate synthase |
? | NC_002947 | = 2316836 | 156 (1.030) | coding (254/888 nt) | PP_2036 | 4‑hydroxy‑tetrahydrodipicolinate synthase |
AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316681‑2316776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < NC_002947/2316836‑2316688 AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGG < 1:2599605/150‑1 AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGG < 1:3935877/150‑1 GAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGC < 1:3146050/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 1:3340214/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 2:1583394/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 2:4301210/150‑1 cTCGGAATGTCGCGGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACGTCGGCGTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCCCCGTGCAGCGTGCCCGCCGGGCACAGGCCTGCGGTGCTACGGCGGTGATG < 2:3577275/149‑1 GATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCAT < 1:1143440/150‑1 ACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < 1:1848373/150‑1 AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316681‑2316776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < NC_002947/2316836‑2316688 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |