| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2316776 | 138 (0.910) | 8 (0.050) | 5/274 | NT | 5.2% | coding (314/888 nt) | PP_2036 | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| ? | NC_002947 | = 2316836 | 156 (1.030) | coding (254/888 nt) | PP_2036 | 4‑hydroxy‑tetrahydrodipicolinate synthase | |||||
AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316681‑2316776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < NC_002947/2316836‑2316688 AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGG < 1:2599605/150‑1AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGG < 1:3935877/150‑1 GAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGC < 1:3146050/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 1:3340214/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 2:1583394/150‑1 TGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGA < 2:4301210/150‑1 cTCGGAATGTCGCGGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACGTCGGCGTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCCCCGTGCAGCGTGCCCGCCGGGCACAGGCCTGCGGTGCTACGGCGGTGATG < 2:3577275/149‑1 GATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCAT < 1:1143440/150‑1 ACCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < 1:1848373/150‑1 AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316681‑2316776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATC < NC_002947/2316836‑2316688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |