| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5543111 = | 95 (0.620) | 5 (0.040) | 4/242 | NT | 5.5% | intergenic (‑156/+160) | PP_4872/dnaB | hypothetical protein/replicative DNA helicase |
| ? | NC_002947 | 5543227 = | 90 (0.670) | intergenic (‑272/+44) | PP_4872/dnaB | hypothetical protein/replicative DNA helicase | |||||
GAATAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5543276‑5543111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgcgtcgcgatgGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACGC > NC_002947/5543227‑5543373 GAATAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCG > 1:4689427/1‑150 ATAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGC < 1:4484717/150‑1 ATAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGC > 1:4205761/1‑150 TAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCC > 2:99756/1‑150 TAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCC > 1:3722025/1‑150 AACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCT > 1:4918317/1‑150 AACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCT > 1:4918310/1‑150 tctaaggGCGTTAGCAGGGGCCCGGGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT < 2:50792/143‑1 ACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT < 1:2972727/150‑1 ACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT > 2:3666551/1‑150 ACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT < 2:3275649/150‑1 ACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT < 2:2896736/150‑1 ACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTT < 1:1641395/150‑1 TAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGa > 1:50792/1‑149 TAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGC > 1:387608/1‑150 TAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGC > 1:319189/1‑150 ATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGT > 2:4692853/1‑150 TGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCG > 1:4215094/1‑150 GCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGC < 1:2740852/150‑1 TTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGAT < 1:1555891/150‑1 TTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGAT < 2:3105545/150‑1 AGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCAAGGCCTTGCAGTTTTTGCACGTTGCAACAAAAGTGGGAGCGGCCTTGCGTCGCGATtc > 1:3184249/1‑148 ATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCAATGGGCTGCAAAGCAGCCCCTCCCCGGGCCCCTGCTcc > 2:1909014/1‑148 GCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGC > 2:2244651/1‑150 GCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGC > 1:4556392/1‑150 GCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTA > 2:3230437/1‑150 GGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGAAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGG < 1:3841999/150‑1 CTTGCGTCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGG < 2:4380113/150‑1 TCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGT < 1:2576958/150‑1 TCGCGATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGT > 1:430751/1‑150 tagGGGCTGCTTTGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACG > 2:4404735/4‑150 GATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACG > 1:2090753/1‑150 ATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACGC < 1:2704811/150‑1 ATGGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATAATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACGC > 2:1357121/1‑150 GAATAACTAATTGCGTTAGCAGGGGCCCTTGTAGGGGCTGCTTTGCAGCCCATCGCGACGCAAGGCCCACATTCGTTTCAACTCGGCCAAGGCGGGCAACGGGCAACCATGGCCTTGCAGTTTTGGCACGTTGCAACAAATGTGGGAGCGGCCTTGCGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5543276‑5543111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgcgtcgcgatgGGCTGCAAAGCAGCCCCTACAAGGGCCCCTGCTAACGCAATTAGTTATTCATCATCATCAAAGTTGTACATCCCCGGCGCCAAGTTCTCGAACCGGGTGTACTTGCCGATAAACGCCAAACGCACGAAGCCGATGGGGCCGTTACGC > NC_002947/5543227‑5543373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |