Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4967553	4967765	213	3 [1]	[0] 2	fliT	flagellar protein

GCCGAAGCGTTGCTCTCTGCCCAGCTTCAGCTGAACAGATGGTATACCTTTGTGGCGTGTTTCGCTTGGTTGATATTCGACATTCGTGCGACCAAGGATTGACGCTCGTCACTTGCAACGTCGATCAGCTGACGATAAACCGCCATCAGCGCTTCCAGATTGGCCCGGATTTCGGCCTCATC  >  NC_002947/4967469‑4967650                                                                                    |                                                                                                   gcCGAAGCGTTGCTCTCTGCCCAGCTTCAGCTGAACAGATGGTATACCTTTGTGGCGTGTTTCGCTTGGTTGATATTCGACAtt                                                                                                    >  1:32139/1‑84 (MQ=255) gcCGAAGCGTTGCTCTCTGCCCAGCTTCAGCTGAACAGATGGTATACCTTTGTGGCGTGTTTCGCTTGGTTGATATTCGACAtt                                                                                                    <  2:32139/84‑1 (MQ=255)                                               ccTTTGTGGCGTGTTTCGCTTGGTTGATATTCGACATTCGTGCGACCAAGGATTGACGCTCGTCACTTGCAACGTCGATCAGCTGACGATAAACCGCCATCAGCGCTTCCAGATTGGCCCGGATTTCGGCCtcatc  >  2:175652/1‑136 (MQ=255)                                                                                    |                                                                                                   GCCGAAGCGTTGCTCTCTGCCCAGCTTCAGCTGAACAGATGGTATACCTTTGTGGCGTGTTTCGCTTGGTTGATATTCGACATTCGTGCGACCAAGGATTGACGCTCGTCACTTGCAACGTCGATCAGCTGACGATAAACCGCCATCAGCGCTTCCAGATTGGCCCGGATTTCGGCCTCATC  >  NC_002947/4967469‑4967650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑