Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4967553	4967765	213	3 [1]	[0] 2	fliT	flagellar protein

TCGATTTGCTGCAGCGCGCTCATGGGGGGCTCCTTACGGTATTATTGCTCGGCGGAGGCGATGGCATCCCAGCCGCTTTTGACAGTGATCATCAACTGCGCGACTTCGTCAATCATGGCCGGATCGCTATGCAGAT  >  NC_002947/4967766‑4967901 |                                                                                                                                        tCGATTTGCTGCAGCGCGCTCATGGGGGGCTCCTTACGGTATTATTGCTCGGCGGAGGCGATGGCATCCCAGCCGCTTTTGACAGTGATCATCAACTGCGCGACTTAGTAAATCAAGGCCGGATCGCAATGCACAt  >  2:228712/1‑136 (MQ=255) tCGATTTGCTGCAGCGCGCTCATGGGGGGCTCCTTACGGTATTATTGCTCGGCGGAGGCGATGGCATCCCAGCCGCTTTTGACAGTGATCATCAACTGCGCGACATCGTCAATCAAGGCCGGATCGATATGCAGAt  >  2:157359/1‑136 (MQ=255) |                                                                                                                                        TCGATTTGCTGCAGCGCGCTCATGGGGGGCTCCTTACGGTATTATTGCTCGGCGGAGGCGATGGCATCCCAGCCGCTTTTGACAGTGATCATCAACTGCGCGACTTCGTCAATCATGGCCGGATCGCTATGCAGAT  >  NC_002947/4967766‑4967901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑