Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4971443	4971910	468	2 [1]	[1] 2	fliC	flagellin

CGGTCGTCATCGCTGTTCGAGCCGTTCGCCGATTGCAGGGCCAGTTCACGCATACGCTGCATGATGTTGCCTGAAGTCGCCATGGCGCCTTCAGCAGTTTGCGCAATAGAGATACCATCGTTGGCGTTCTTGACCGCAACGCTCAGACCTTTGATTTGAGTGG  >  NC_002947/4971884‑4972046                            |                                                                                                                                        cgGTCGTCATCGCTGTTCGAGCCGTTCGCCGATTGCAGGGCCAGTTCACGCATACGCTGCATGATGTTGCCTGAAGTCGCCATGGCGCCTTCAGCAGGTTGCGGCATAGAGATACCATCGTTGGCGTTCTTGCCCg                             >  2:8502/1‑136 (MQ=255)                            gCCGATTGCAGGGCCAGTTCACGCATACGCTGCATGATGTTGCCAGAAGTCGCCATGGCGCCTTCAGCAGTTTTCGCAAAATAGATACCATCCTTGGCCTTCTTGACCGCCACGCACACACCTTTGATTTTAGTgg  >  1:250263/1‑136 (MQ=255)                            |                                                                                                                                        CGGTCGTCATCGCTGTTCGAGCCGTTCGCCGATTGCAGGGCCAGTTCACGCATACGCTGCATGATGTTGCCTGAAGTCGCCATGGCGCCTTCAGCAGTTTGCGCAATAGAGATACCATCGTTGGCGTTCTTGACCGCAACGCTCAGACCTTTGATTTGAGTGG  >  NC_002947/4971884‑4972046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑