New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 100459	104 (0.630)	6 (0.040)	6/234	NT	5.1%	intergenic (‑51/+71)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	= 100507	132 (0.920)					intergenic (‑99/+23)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein

CCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/100297‑100459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgcCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGACC  <  NC_002947/100507‑100360                                                                                                                                                                                                                                                                                                                         CCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCG                                                                                                                                                                   >  2:4201331/1‑150  CGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGC                                                                                                                                                                  <  1:944074/150‑1  CGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGC                                                                                                                                                                  <  1:3686434/150‑1    GTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGG                                                                                                                                                                >  2:5018111/1‑150    GTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGG                                                                                                                                                                >  1:1843500/1‑150    GTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGCGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGG                                                                                                                                                                <  1:3156569/150‑1        GTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCAT                                                                                                                                                            >  2:1457966/1‑150         TCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATG                                                                                                                                                           >  1:1723407/1‑150          CGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          <  1:1518969/150‑1          CGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          <  1:2815702/150‑1          CGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          <  1:2815481/150‑1          CGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          <  1:2492870/150‑1           GATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCC                                                                                                                                                         >  2:5399417/1‑150           GATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCC                                                                                                                                                         >  1:1311804/1‑150           GATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCC                                                                                                                                                         >  1:840159/1‑150           GATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCC                                                                                                                                                         <  1:4316683/150‑1                                                     GCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCTCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTA                                                                                                               <  2:5119949/150‑1                                                       CCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          >  2:3528453/1‑105                                                       CCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGC                                                                                                                                                          <  1:3528453/105‑1                                                                  TCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG                                                                                                  <  2:1266597/150‑1                                                                   CGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGG                                                                                                 <  1:1985913/150‑1                                                                    tGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGC                                                                                                <  2:840159/149‑1                                                                     GTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCA                                                                                               <  1:5391244/150‑1                                                                      TCAGGGTGCCGTCGAGGTCGAAGCGGATGTTTTGCGGGGGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCAT                                                                                              <  1:3866187/150‑1                                                                                                                                               CTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTG                                                                                                         >  1:2473211/1‑66                                                                                                                                               CTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTG                                                                                                         <  2:2473211/66‑1                                                                                                                                                TTCGTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGC                                                                                                    <  1:4323957/70‑1                                                                                                                                                  ctgCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGAC                  >  2:801350/4‑150                                                                                                                                                   TTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACG                 <  2:2596053/150‑1                                                                                                                                                    TCGCGGGCATGCCCGCCCCCGCAGGTTTAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAATTGGAACCCTGTACAAGCACCAGCAAAAAATACTCTTAGACCGAGACGG                >  1:1547489/1‑150                                                                                                                                                      GCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCA              <  2:4576578/150‑1                                                                                                                                                          GCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCT          <  2:1355397/150‑1                                                                                                                                                          GCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCT          <  2:707644/150‑1                                                                                                                                                            ATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGA        <  2:997367/150‑1                                                                                                                                                            ATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACAT                                                 <  2:312162/109‑1                                                                                                                                                            ATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACAT                                                 >  1:312162/1‑109                                                                                                                                                            ATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTGTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGA        <  2:664502/150‑1                                                                                                                                                             TGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGACACCCTGAC       <  1:3228691/150‑1                                                                                                                                                               CCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCG     >  2:3804333/1‑150                                                                                                                                                                CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGA    >  2:4449442/1‑150                                                                                                                                                                CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGA    >  2:4449503/1‑150                                                                                                                                                                CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGA    >  1:5399417/1‑150                                                                                                                                                                CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGAC                  <  2:5320914/136‑1                                                                                                                                                                CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGAC                  >  1:5320914/1‑136                                                                                                                                                                 CGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCCTGCCCGCGACGAAGGCCACGCAGCACTCACGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGAC   >  2:2834517/1‑150                                                                                                                                                                  GCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCactt  >  1:411181/1‑146                                                                                                                                                                                                                                                                                                                         CCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/100297‑100459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgcCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGACCGACC  <  NC_002947/100507‑100360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.