| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2080205 = | 60 (0.360) | 11 (0.080) | 5/234 | NT | 15.2% | intergenic (+25/+90) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| ? | NC_002947 | 2080286 = | 70 (0.490) | intergenic (+106/+9) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein | |||||
CAACTGCTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2080369‑2080205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgggcccgcgaaGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACC > NC_002947/2080286‑2080434 CAACTGCTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCGCCCACAAGGACCCCACTGTCTTCAGGGCTGGGCTAACACTGTGGGTGC > 1:3079007/1‑150CAACTGCTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCCCGCCCCCAAGGACCCCACGGTCTTCAGGGCGGGGATATCCCGGTGGGTGg > 1:350021/1‑149 TGCTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCGGTGATATCCCGGTGGGTGCGGGC > 2:307270/1‑150 CTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGG < 2:4693471/150‑1 CTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGG < 1:551022/150‑1 CTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGG < 1:4188412/150‑1 GCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACACGGACCCCCCTGGCTGCAGGGCTGGGCGCTACCGGGGGGTGCGGGCGGGCCC > 1:2604379/1‑150 GCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCC < 2:4939491/150‑1 AAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCACCCACAAGGACCCCACGGTCTTCAGGGCGGTGATATACCTGTGGGTGCGGGCGGGCCCGC > 2:5085673/1‑150 GCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCCCGCCCGCac < 2:2540949/150‑3 GCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCCCGCCCGCac < 2:4846673/150‑3 GACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGG > 1:2158286/1‑128 GACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGG < 2:2158286/128‑1 TTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGG > 2:381152/1‑94 TTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGG < 1:381152/94‑1 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCA > 2:933998/1‑150 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACC < 1:3557619/137‑1 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACC > 2:3557619/1‑137 CCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT > 1:2863855/1‑150 CCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT > 1:5359255/1‑150 CCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT > 1:2634100/1‑150 CGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTT > 1:1807226/1‑150 CGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTT > 2:3673515/1‑150 CTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGC > 2:5006180/1‑150 CACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCC > 2:1830898/1‑150 CCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGC > 2:3619544/1‑150 cGCGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACC < 1:3203197/149‑1 CGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCT > 2:453403/1‑150 GGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTC > 2:1392479/1‑150 GGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAA > 1:1385633/1‑150 GCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAAT > 1:33399/1‑150 GCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAAT > 1:1731534/1‑150 CCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATC < 2:4262278/150‑1 CCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCT > 2:3306496/1‑150 CCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCT > 2:3306005/1‑150 CCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCT > 2:2933391/1‑150 CCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCT > 1:574756/1‑150 CGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTT > 2:4576186/1‑150 GCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTC > 2:2719851/1‑150 GCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACC‑TCACCAGCCCGTCACCCTCGCCAATCTTCA > 1:1309072/1‑150 GAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAA > 2:1438138/1‑150 GAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAA > 2:1437954/1‑150 AGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACC > 1:2765715/1‑150 CAACTGCTGGGCAAGCGGGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2080369‑2080205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgggcccgcgaaGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACC > NC_002947/2080286‑2080434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |