New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2100380 =	164 (1.000)	10 (0.070)	9/240	NT	6.7%	coding (1475/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2100429 =	130 (0.880)					coding (1426/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

TCGGCCGCGTCGACGTGCGCTTGGCGGCCATTGTCGGTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2100542‑2100380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTG  >  NC_002947/2100429‑2100577                                                                                                                                                                                                                                                                                                                          TCGGCCGCGTCGACGTGCGCTTGGCGGCCATTGTCGGTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTG                                                                                                                                                                    <  2:1971378/150‑1  CGGCCGCGTCGACGTGCGCTTGGCGGCCATTGTCGGTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGG                                                                                                                                                                   <  1:4937356/150‑1      CGCGTCGACGTGCGCTTGGCGGCCATTGTCGGTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACC                                                                                                                                                               <  2:4833759/150‑1           CGACGTGGGGTTGGCGGCCTTTGTGGTTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCAGCCCCGAAGACGCCCAGGGGCGCATCTTCCAGCCCTTCACCCAGGCGGGTGCCGGAATCACCCGCCAGTACGGTGGCACCGGCCT                                                                                                                                                          <  2:4116728/150‑1           CGACGTGCGCTTGGCGGCCTTTGTCGGTGGTGTGCGTCTGGTGGTACGGTATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCT                                                                                                                                                          <  2:1151694/150‑1                                          GTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGG                                                                                                                                                        >  1:2106645/1‑121                                          GTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGG                                                                                                                                                        <  2:2106645/121‑1                                                                                                               TTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCG                                                      >  1:3113137/1‑150                                                                                                                TCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGC                                                     >  1:1724053/1‑150                                                                                                                   CCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACG                                                  >  1:1647381/1‑150                                                                                                                    CCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGT                                                 >  2:5431747/1‑150                                                                                                                    CCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACC                                                                        >  1:4093094/1‑127                                                                                                                    CCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACC                                                                        <  2:4093094/127‑1                                                                                                                      AGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAA                                                         <  1:4038254/140‑1                                                                                                                      AGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAA                                                         >  2:4038254/1‑140                                                                                                                           GGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCG                                          >  2:1257350/1‑150                                                                                                                            GTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGG                                         >  1:4364371/1‑150                                                                                                                                                      GGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACCATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTT               >  2:787511/1‑150                                                                                                                                                      GGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTT               <  2:2359257/150‑1                                                                                                                                                      GGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTT               >  1:3106710/1‑150                                                                                                                                                      GGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTT               >  1:44688/1‑150                                                                                                                                                       GCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTG              <  1:2902608/150‑1                                                                                                                                                         ACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGA            <  1:2976236/150‑1                                                                                                                                                         ACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGA            <  2:4228424/150‑1                                                                                                                                                           CGGCCTGGGTGGAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACA          <  2:2326509/150‑1                                                                                                                                                           CGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACA          <  1:207078/150‑1                                                                                                                                                              CCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCA       <  2:2428168/150‑1                                                                                                                                                                  GGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTT   >  2:1452126/1‑150                                                                                                                                                                   GTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTG  <  1:4706982/150‑1                                                                                                                                                                                                                                                                                                                          TCGGCCGCGTCGACGTGCGCTTGGCGGCCATTGTCGGTGGTGTGCGTCTGGAGGTACGGGATACCGGCATCGGCATCCCCGAAGACGCCCAGGCGCGCATCTTCCAGCCCTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2100542‑2100380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaccggcctgggTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCCGAAGCGGGTGAACTTCAGCGCGTTGGACAGCAGGTTG  >  NC_002947/2100429‑2100577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.