| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2713489 | 171 (1.040) | 9 (0.060) | 8/260 | NT | 5.1% | coding (3580/3708 nt) | metH | cobalamin‑dependent methionine synthase |
| ? | NC_002947 | = 2713505 | 169 (1.060) | coding (3564/3708 nt) | metH | cobalamin‑dependent methionine synthase | |||||
GCGAAGAAGCCAGCGCAGTCGTTTAGCTGTCATACCCCAGGTTAGGCGCCAGCCAGCGCTCGCTCACGCTGATATCCTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGCCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2713339‑2713489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAAAC < NC_002947/2713505‑2713359 GCGAAGAAGCCAGCGCAGTCGTTTAGCTGTCATACCCCAGGTTAGGCGCCAGCCAGCGCTCGCTCACGCTGATATCCTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGCCTGCG > 2:1472278/1‑150GCGAAGAAGCCAGCGCAGTCGTTTAGCTGTCATACCCCAGGTTAGGCGCCAGCCAGCGCTCGCTCACGCTGATATCCTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGCCTGCG < 2:4113450/150‑1 TTAGCTGTCATACCCCAGGTTAGGCGCCAGCCAGCGCTCGCTCACGCTGATATCCTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGCCTGCGGCTGGTACTTCGCCCACCCGCA < 1:3091203/150‑1 CTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGTCAGCGGCTGGTACTTCGCCCACCCGCAG > 1:3773267/1‑97 CTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGTCAGCGGCTGGTACTTCGCCCACCCGCAG < 2:3773267/97‑1 CTTGCCTACGGCAAAATACTTCGCCTGCGGGTGGGCGAAGTACCAGCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGC > 1:4680391/1‑150 CTTGCCTACGGCAAAATACTTCGCCTGCGGGGGGGCGAAGTACCAGCCGCAGGCGAAGTATTTTTCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGC > 1:4680311/1‑150 GCCTACGGCAAAATACTTCGCCTGCGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCC > 2:3234575/1‑150 CCTACGGCAAAATACTTCGCCTGCGGGTGGGCGAAGTACCAGCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGG < 1:1345803/118‑1 CCTACGGCAAAATACTTCGCCTGCGGGTGGGCGAAGTACCAGCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGG > 2:1345803/1‑118 TTCGCCAGCGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGAC > 2:785794/1‑150 cGCGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAA < 1:3107103/149‑1 GCGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAAA < 1:5352829/150‑1 GCGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAAA > 2:3187860/1‑150 CGGCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAAAC < 1:5145695/150‑1 GCGAAGAAGCCAGCGCAGTCGTTTAGCTGTCATACCCCAGGTTAGGCGCCAGCCAGCGCTCGCTCACGCTGATATCCTGGCCTTTGCGTGCGCTGTAACGCTCGATCTGGTCCTTGTCGACCTTGCCTACGGCAAAATACTTCGCCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2713339‑2713489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCTGGTACTTCGCCCACCCGCAGGCGAAGTATTTTGCCGTAGGCAAGGTCGACAAGGACCAGATCGAGCGTTACAGCGCACGCAAAGGCCAGGATATCAGCGTGAGCGAGCGCTGGCTGGCGCCTAACCTGGGGTATGACAGCTAAAC < NC_002947/2713505‑2713359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |