| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2777266 = | 163 (0.990) | 8 (0.050) | 6/256 | NT | 5.1% | coding (211/1353 nt) | PP_5521 | hypothetical protein |
| ? | NC_002947 | 2777291 = | 145 (0.920) | coding (186/1353 nt) | PP_5521 | hypothetical protein | |||||
CAGCAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2777419‑2777266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcca‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTCCA > NC_002947/2777291‑2777439 CAGCAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCA > 2:1723231/1‑150 AGCAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCCCCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAG > 1:5142069/1‑150 AGCAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAG < 2:5333613/150‑1 AGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCA > 2:3488988/1‑150 CGCCTATGCCCAGGCCGTCAACGACTACGGCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGCCTGCAGGGCTGACAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCG < 1:2997420/150‑1 CCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGG > 1:3988547/1‑150 GACGCCTGGCTGTCAGCCCTGCAGG‑‑‑‑CA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCA > 2:1381795/1‑150 TGGCTGTCAGCCCTGCAGG‑‑‑‑CA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTG > 1:3826530/1‑150 GGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG < 2:634311/69‑1 GGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG > 1:634311/1‑69 GGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG > 1:634303/1‑69 GGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG < 2:634303/69‑1 CAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTT < 1:3999233/150‑1 CAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTT < 2:2012175/150‑1 CAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTT < 1:2750303/150‑1 CAGCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTT < 1:1234621/150‑1 GCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGT > 2:877811/1‑150 GCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGT < 1:5210558/150‑1 GCCA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGT < 1:5210388/150‑1 CA‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTCC > 1:1734754/1‑150 A‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTCCA > 2:4042692/1‑150 CAGCAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2777419‑2777266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcca‑‑‑‑‑‑‑‑GGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTCCA > NC_002947/2777291‑2777439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |