| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3341082 = | 108 (0.660) | 7 (0.050) | 5/224 | NT | 8.2% | intergenic (‑119/+124) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase |
| ? | NC_002947 | 3341170 = | 67 (0.490) | intergenic (‑207/+36) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase | |||||
GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3341249‑3341082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3341170‑3341318 GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGC < 1:3149100/150‑1 ACCTACGATGACTACCTGCGGAGCCAGGGTGTGCTGGTCTGATTGAGGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGG < 2:4146740/150‑1 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCA < 1:2367489/150‑1 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCGTGTGGGG‑CCGTGGGAGAGCGGGCA > 1:4463777/1‑150 cCGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 2:4208426/149‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 1:1424526/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 2:4208287/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 2:3620777/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 1:4353001/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 1:3011002/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 1:1882411/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 1:2864367/150‑1 CGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAG < 1:3742512/150‑1 CGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGG > 2:4216530/1‑145 CGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGG < 1:4216530/145‑1 GATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGC < 1:3021423/150‑1 TACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCGTGGGAGAGCGGGCAAGCCCGCGA > 2:4596597/1‑150 acgTGCGGAGCCAGGGTGTGCTGGTCTGATTGTTGGGAGGGCCTGGCCATCTCGGATGGCGGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAA < 2:2910431/147‑1 GGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCTTGCCCGCtctc > 2:350348/1‑94 GGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCTTGCCCGCtctc < 1:350348/98‑5 CTTGCCCGCTCCCACAGGGACCGCACAGGTCTTGGACGCTTGTGGGGCCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCAGCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATC > 2:1521728/1‑150 CCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGG > 1:3917037/1‑150 CCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGC > 1:1428658/1‑150 CCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCT > 1:2253035/1‑150 CCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCT > 1:3412089/1‑150 CCACAGGGACAGCACAGGTATTGGACTCTTGTGGGG‑CCTTGG‑‑GAGCGGGCAAGCCCGCGAATAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATAAATCAGAACAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGA > 2:2523541/1‑150 GGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGAT > 1:3342027/1‑150 GAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGG < 2:3011002/150‑1 GCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCG > 1:2866974/1‑150 AAGCCCGGGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCCCACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGAC > 1:2983866/1‑150 AAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGAC > 1:2983722/1‑150 AAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGAC > 2:785216/1‑150 GCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGA > 2:203020/1‑150 GCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAA < 1:542858/99‑1 GCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAA > 2:542858/1‑99 CCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGAC > 2:4082771/1‑150 CCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACA < 1:3716390/150‑1 CGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACAC < 2:2367489/150‑1 CGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACAC < 2:4249982/150‑1 CGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGA < 1:1368193/150‑1 GAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAA < 1:3398711/150‑1 acGGCCTGGCCATCTCGGATGGCCGGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTC > 1:4759265/3‑150 GGCCTGGCCATCTCGGATGGCCCGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > 1:4316869/1‑150 GGCCCTGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC < 2:1400408/150‑1 GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3341249‑3341082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3341170‑3341318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |