| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3934753 = | 153 (0.930) | 10 (0.060) | 6/256 | NT | 6.4% | coding (690/1710 nt) | PP_3466 | ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | 3934792 = | 146 (0.930) | coding (651/1710 nt) | PP_3466 | ABC transporter permease/ATP‑binding protein | |||||
TGTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3934904‑3934753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAGC > NC_002947/3934792‑3934939 TGTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCC > 2:4375527/1‑150TGTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCC > 2:3624975/1‑150 ggGGCTGCGCGGGCTGCGGCGCCAGGTGGAGCGCGAAGTGCGCACCTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGCTGAAGTTCATTCAGGCGGCCGGCCAGCACGGCCGGGAAGCAGGGCGCCT < 2:3043648/148‑1 GTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCT < 2:4853659/150‑1 GTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCT < 2:3033138/150‑1 TGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTG < 1:297972/150‑1 GTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGGATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGC > 1:2080578/1‑150 GTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGC > 1:5426378/1‑150 GTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGC > 1:5426421/1‑150 TCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGC > 1:5212647/1‑150 TCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGC > 1:5212651/1‑150 ATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACTACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAG > 2:5312110/1‑150 TTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGGATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGC > 2:577480/1‑150 TTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGC > 1:2449499/1‑150 GCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGAC < 2:1551461/76‑1 GCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGAC > 1:1551461/1‑76 CCTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGGTCGGCACCAGCAGCGCCAGCAACA > 1:3256788/1‑150 CTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAG < 1:3882921/150‑1 CTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAG > 1:1586587/1‑150 CTGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAG > 1:1586548/1‑150 TGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAGC > 2:2839744/1‑150 TGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAGC > 2:2839805/1‑150 TGAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAGC < 1:1637985/150‑1 TGTGGCTGCGCTGGATGCGGCGCAAGGTGGAGCGCGAAGTGCGCAACTTGCGTGAGCGCTCGGCGGATGTGTCGTCTTTCCTGGTCGAGACCCTGCCGGCGATGAAGTTCATTCAGGCGGCCGGCCAGCAAGGCCGGGAAGCAGGGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3934904‑3934753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgAATGAACTTCATCGCCGGCAGGGTCTCGACCAGGAAAGACGACACATCCGCCGAGCGCTCACGCAAGTTGCGCACTTCGCGCTCCACCTTGCGCCGCATCCAGCGCAGCCACAGCACTTCGATCGGCACCAGCAGCGCCAGCAACAGC > NC_002947/3934792‑3934939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |