New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4055930	184 (1.120)	11 (0.070)	7/254	NT	5.7%	coding (538/1320 nt)	PP_3573	monooxygenase
	?	NC_002947	= 4055955	189 (1.210)					coding (563/1320 nt)	PP_3573	monooxygenase

GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4055775‑4055930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCGGCACCGACCACCAGTACCGCGCCTTCAGGCAACTGCTCTGGGTTGAAGTAAGCGGCGGAATGAATCTGGTGCAGGTTGCTGTCTTTCGGCGCGATGGCCGGGATCACC  <  NC_002947/4055955‑4055809                                                                                                                                                                                                                                                                                                                 GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTT                                                                                                                                                           <  2:3934446/150‑1   GTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCC                                                                                                                                                         <  1:5113873/150‑1   GTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGAGTCAGTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCC                                                                                                                                                         <  2:276880/150‑1    TAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCG                                                                                                                                                        <  2:4668279/150‑1     AGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGG                                                                                                                                                       <  1:3605271/150‑1     AGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGG                                                                                                                                                       <  1:3605314/150‑1      GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC                                                                                                                                                      <  2:3035828/150‑1      GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC                                                                                                                                                      <  2:3785471/150‑1                                 CCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCAC                                                                                                                           <  2:4740869/150‑1                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    <  1:1445135/118‑1                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    <  1:4191718/118‑1                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    <  1:4191876/118‑1                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    >  2:4191876/1‑118                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    >  2:1445135/1‑118                                                                        CACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA                                                                                                                    >  2:4191718/1‑118                                                                                                   AACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGG                                                                                                                      >  2:706471/1‑89                                                                                                   AACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGG                                                                                                                      <  1:706471/89‑1                                                                                                     CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCGTCCGGCGCGCATCAGCTCTTCGGCAATCTGCA                                                                                                                            <  2:3814872/81‑1                                                                                                     CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCGTCCGGCGCGCATCAGCTCTTCGGCAATCTGCA                                                                                                                            >  1:3814872/1‑81                                                                                                                                                      TCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCGGCACCGACCACCAGTACCGCGCCTTCAGGCAACTGCTCTGGGTTGAAGTAAGCGGCGGAATGAATCTGGTGCAGGTTGCTGTCTTTCGGCGCGATGGCCGGGAT      >  1:1280507/1‑150                                                                                                                                                         GGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCGGCACCGACCACCAGTACCGCGCCTTCAGGCAACTGCTCTGGGTTGAAGTAAGCGGCGGAATGAATCTGGTGCAGGTTGCTGTCTTTCGGCGCGATGGCCGGGATCAC   <  2:5402947/150‑1                                                                                                                                                          GCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCGGCACCGACCACCAGTACCGCGCCTTCAGGCAACTGCTCTGGGTTGAAGTAAGCGGCGGAATGAATCTGGTGCAGGTTGCTGTCTTTCGGCGCGATGGCCGGGATCACC  <  1:1146362/150‑1                                                                                                                                                                                                                                                                                                                 GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4055775‑4055930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCGGCACCGACCACCAGTACCGCGCCTTCAGGCAACTGCTCTGGGTTGAAGTAAGCGGCGGAATGAATCTGGTGCAGGTTGCTGTCTTTCGGCGCGATGGCCGGGATCACC  <  NC_002947/4055955‑4055809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.