| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5117384 | 192 (1.170) | 14 (0.090) | 8/262 | NT | 6.9% | coding (372/861 nt) | PP_4500 | TrpH family protein |
| ? | NC_002947 | = 5117412 | 192 (1.190) | coding (344/861 nt) | PP_4500 | TrpH family protein | |||||
CAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5117258‑5117384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCACGTCAAGGACCGTGGTGAAGCGTTTCGCAAGTGGCTGGGCGCCG < NC_002947/5117412‑5117266 CAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGC < 1:3726613/127‑1CAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGC > 2:3726613/1‑127 TGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCACGCTCGAAGGCGCGCGCGCCGT < 2:3516247/150‑1 GCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAATATGCGGGCGCGCCGGGGCGTTGCCGCTGTCCCCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 1:5057000/150‑1 GCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCCCCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 2:1931057/150‑1 GCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 1:5056999/150‑1 GCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 2:2699553/150‑1 GCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGC < 1:1074020/150‑1 CGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCA < 1:3824209/150‑1 AAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCTGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCACGCTCGAAGGCGCGCGCGCC < 1:4233359/126‑1 AAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCTGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCACGCTCGAAGGCGCGCGCGCC > 2:4233359/1‑126 TCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 2:5112682/83‑1 TCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG < 2:2383742/83‑1 TCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG > 1:5112682/1‑83 TCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCCCGGCACGCTCGAAGGCGCGCGCGCCGTG > 1:2383742/1‑83 ACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCACGTCAAGGACCGTGGTGAAGCGTTTCGCAAG > 2:1402720/1‑150 TGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCACGTCAAGGACCGTGGTGAAGCGTTTCGCACGTGGCTGGGCGCCG > 2:3944449/1‑150 TGCCCGGCACGCGCGATGGCGCGCGCGCCGTGCCGCACGAGTGGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCAGTTTGCCGAGTATCTGGTGCGGGCCGGGCACGTCAAGGACCGTGGTGACGCGGTTCGCAAGTGGCTGGGCGCCG > 2:3944456/1‑150 CAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5117258‑5117384‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCACGTCAAGGACCGTGGTGAAGCGTTTCGCAAGTGGCTGGGCGCCG < NC_002947/5117412‑5117266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |