New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3949879 =48 (0.290)23 (0.180) 13/212 NT 36.5% coding (136/1797 nt) PP_3483 type II secretion system protein
?NC_002947 3949964 = 42 (0.320)coding (51/1797 nt) PP_3483 type II secretion system protein

Only 100 of 165 total aligned reads displayed.

GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3949730‑3950028
                                                                                                                                                     |                                                                                                                                                     
gTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTT                                                                                                                                                       >  1:1284529‑M1/1‑150 (MQ=255)
cagggcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgt                                                                                                                                                       >  2:4843588‑M1/150‑150 (MQ=255)
 agggcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTc                                                                                                                                                      <  2:2498564‑M1/2‑1 (MQ=255)
    gcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTc                                                                                                                                                   <  1:260066‑M1/5‑1 (MQ=255)
     gCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCG                                                                                                                                                  >  1:3755197‑M1/1‑150 (MQ=255)
     cccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcagtcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTcg                                                                                                                                                  >  1:4888359‑M1/145‑150 (MQ=255)
       aGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCG                                                                                                                                                >  2:641488‑M1/1‑150 (MQ=255)
        gacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCgg                                                                                                                                               >  2:5383930‑M1/142‑150 (MQ=255)
        gacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCgg                                                                                                                                               >  1:1433437‑M1/142‑150 (MQ=255)
           gacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCa                                                                                                                                            >  2:109538‑M1/139‑150 (MQ=255)
              gatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGc                                                                                                                                         <  2:3989728‑M1/15‑1 (MQ=255)
               gCCCCGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGGAGGCGGAAATTTTTGCGGGGTTCTTCGCGGGCATGCC                                                                                                                                        >  2:208314‑M1/1‑150 (MQ=255)
               gCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCC                                                                                                                                        >  2:3957084‑M1/1‑150 (MQ=255)
               gCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCAT                                                                                                                                           <  1:1061760‑M1/147‑1 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       >  2:842201‑M1/134‑150 (MQ=255)
                cccAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCC                                                                                                                                       <  1:2713217‑M1/150‑1 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCCTGCCCGcgccccc                                                                                                                               <  1:1102915‑M1/25‑3 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCCTGCCCGCTCCcac                                                                                                                               <  1:4222744‑M1/25‑1 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcac                                                                                                                               <  2:822214‑M1/25‑1 (MQ=255)
                        tcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcac                                                                                                                               >  2:4596045‑M1/126‑150 (MQ=255)
                         cGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACA                                                                                                                              <  2:3461741‑M1/150‑1 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGGAGGCCCGCGcccaccc                                                                                                                             <  1:4684828‑M1/27‑3 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  2:2660818‑M1/124‑150 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  2:3806891‑M1/124‑150 (MQ=255)
                               ggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCggg                                                                                                                                              >  1:1197071‑M1/119‑128 (MQ=255)
                               ggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCggg                                                                                                                                              <  2:1197071‑M1/10‑1 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGTGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   <  2:3307832/150‑1 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   >  2:1277049/1‑150 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   <  1:2074217/150‑1 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   <  1:4528649/150‑1 (MQ=255)
                                    gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                   <  1:1876074/150‑1 (MQ=255)
                                     tCGGGGGTGGCGCAGGCCAGGCGGTCCAGGCAGTCGAGCAGGCGCTCGTCTGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATccccg                                                                                                                  <  1:2937078/150‑5 (MQ=255)
                                           gtgtCGCTGGCCTGGCGTTCCAGGCAGTCGAGCTGGCGCTCGTCTGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCTTGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                            <  1:2561563/150‑1 (MQ=39)
                                           gtgtCGCAGGCCAGGCGTTGCTTGCAGTCGAGCAGGCTCTGGTCAGTGGCTTGGAGACGGGCCTGGGCCTGGAGGTCGGGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCTTGCCCGCTCCCACAGGTACATCACAGGTCttt                                                                                                            <  1:99976/150‑3 (MQ=38)
                                              tCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTggg                                                                                                         >  1:4168762/1‑150 (MQ=255)
                                              tCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTggg                                                                                                         <  2:4168762/150‑1 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACGGGTACATCACAGGTCTGTGGGCt                                                                                                       >  1:2714401/1‑150 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGG                                                                                                                            >  2:2440725‑M1/1‑129 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGG                                                                                                                            <  1:2440725‑M1/129‑1 (MQ=255)
                                                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTCCCTCACCGGTCGGTGGGCt                                                                                                       >  1:1590286/1‑150 (MQ=255)
                                                gCAGGCCAGGCGTTCCAAGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCt                                                                                                       >  2:1102915/1‑150 (MQ=255)
                                                 caggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTg                                                                                                      >  2:1368177/1‑150 (MQ=255)
                                                  aggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGc                                                                                                     <  1:641488/150‑1 (MQ=255)
                                                   cctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                    <  2:4457241‑M1/52‑1 (MQ=255)
                                                    gccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGGCTGTGGGCTGCAt                                                                                                   >  2:1411936/1‑150 (MQ=255)
                                                    gccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCAT                                                                                                                                           <  1:3251820‑M1/110‑1 (MQ=255)
                                                    gccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCAT                                                                                                                                           >  2:3251820‑M1/1‑110 (MQ=255)
                                                     ccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCCGGAGGTCGCGGGGGTAGGTGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCAtc                                                                                                  >  2:3749403/1‑149 (MQ=255)
                                                         gCGTTCCTGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              >  1:166630‑M2/1‑149 (MQ=255)
                                                         gCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              >  1:397179‑M2/1‑149 (MQ=255)
                                                              ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGGATGCCCGCGCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcgtgtg                                                                                         <  2:4780742‑M2/150‑7 (MQ=255)
                                                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        >  1:3271189‑M1/87‑150 (MQ=255)
                                                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        >  1:4152725‑M1/87‑150 (MQ=255)
                                                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        >  1:3441434‑M1/87‑150 (MQ=255)
                                                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcagtcgatgcaaccccggaatctgcaaagcctgcaccgacgTCGTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        >  2:1327316‑M1/87‑150 (MQ=255)
                                                                gcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTggg                                                                                       >  2:4579485‑M1/86‑150 (MQ=255)
                                                                aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtggg                                                                                       <  2:2693487‑M1/150‑38 (MQ=255)
                                                                aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATAACAGGTCTGTGGGCTGCATAAATcctgtggg                                                                                       <  2:2475127‑M2/150‑9 (MQ=255)
                                                                 ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtggga                                                                                      <  1:1751476‑M1/150‑39 (MQ=255)
                                                                 cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                      >  2:1733258‑M1/85‑150 (MQ=255)
                                                                 cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                      >  1:778663‑M1/85‑150 (MQ=255)
                                                                    gcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCg                                                                                   >  2:4046708‑M1/82‑150 (MQ=255)
                                                                     gTCGCGCAGGCGCTCGTCAGTGGCGTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCGTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgg                                                                                  <  2:4305361‑M1/150‑43 (MQ=255)
                                                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgg                                                                                  <  1:4333069‑M1/150‑43 (MQ=255)
                                                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                  >  1:836471‑M2/1‑137 (MQ=255)
                                                                     cgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  1:877373‑M1/81‑150 (MQ=255)
                                                                      tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                 >  1:4631853‑M2/1‑136 (MQ=255)
                                                                       cGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggc                                                                                <  2:1224203‑M1/150‑45 (MQ=255)
                                                                         aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcat                                                                              <  1:362280‑M1/150‑47 (MQ=255)
                                                                          gCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGGCAGGTGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCTGGCATGCCCGCTCCCACAGGTTCATCACAGGTCTGTGGGCTGCATTCATcctgtgggagcgggcatg                                                                             >  2:2558820‑M2/1‑132 (MQ=255)
                                                                          gCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatg                                                                             >  1:1962915‑M2/1‑132 (MQ=255)
                                                                            aGGCGCTCGTCAGTGGCTGGCAGACGGGCCTGGGCCTGGAGGGCGGGGGGGTGGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcc                                                                           >  1:1382331‑M2/1‑130 (MQ=255)
                                                                             ccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGCCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGccc                                                                          >  2:2426101‑M1/73‑150 (MQ=255)
                                                                              gcgcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccg                                                                         <  2:4222744‑M2/150‑23 (MQ=255)
                                                                                gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcg                                                                       <  2:260066‑M2/150‑25 (MQ=255)
                                                                                gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                    <  2:2887742/121‑1 (MQ=255)
                                                                                gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                    >  1:2887742/1‑121 (MQ=255)
                                                                                  tCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTGCATCACAGGGCTGTGGGCTGCATACATcctgtgggagcggggatgcccgcgac                                                                     <  1:1940900‑M2/150‑27 (MQ=255)
                                                                                               gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGACGACGTCGGTGCAg                                                        >  2:1034782/1‑150 (MQ=255)
                                                                                               gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCAGGGGCATCAGCGGTGTGTGGGCGGCATACAGCGGGTGGGAGCGGGCCTGCCCGCGGAGAGGGCGGGGCAg                                                        >  1:3076128/1‑150 (MQ=255)
                                                                                                        ccTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGGACATCACAGGTCGGTGGGCTGCATACATCAAGTGGGATCGGGGATGCCCCCGAAGAAGGCGGTGCAGGCATTGGAg                                               >  1:899557/1‑150 (MQ=255)
                                                                                                             gCCAGGAGGTCGCGGGGGTAGGCGGAAATTGTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCAAGCCCGCGAAGACGGCGGTGCAGGCTTTGCAGAGTcc                                          >  2:2740485/1‑150 (MQ=39)
                                                                                                              ttcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGc                                                                                >  1:2564723‑M1/40‑111 (MQ=255)
                                                                                                              ccAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATTCCCGCACCCACAGGTACATAACAGGTCTGTGGGCTGCATACAACCTGTTGGAGCGGGCAGGCCCCCGCCGAAGTCGGTGCAGGCGTTGCCGAATCCg                                         >  1:2498564/1‑150 (MQ=255)
                                                                                                               cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTACATCACCGGTCTGTGGGCGGCCTACATCCGGTGGGAGCGGGCCAGCCCCCGCAGACGTCGGTGCAGGCGTTTCAGATTCCgg                                        >  1:4302959/1‑150 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  <  1:1266412‑M1/70‑1 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  2:1266801‑M1/37‑106 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  2:1266412‑M1/37‑106 (MQ=255)
                                                                                                                   cgggcgcgGGGGTAGGCGGACATGTTTGCGGGGTCCTTCGCGGGCAGGCCCGCTCCCACTGGTACCTCCCAGGTCTGTGGGCTGCATACAGCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                    <  2:4831263/146‑1 (MQ=255)
                                                                                                                   cggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTGTTCGCGGGCATGCCCGCTCCCACCGGTCCAGCACTGGTGTGTGGGCGGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                    <  2:3934194/149‑1 (MQ=255)
                                                                                                                     gtggggggggTTGGCGGAACTTTTGGCTGGGTGCTTCGGGGGCAGGCCCGCTCCCACCGGTACAGCCCGGGTCTGGGGGCTGCATCCCGCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGc                                  <  2:2570144/145‑1 (MQ=255)
                                                                                                                           ggggTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACTGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGCAGCAtggcc                            <  2:2714401/150‑5 (MQ=39)
                                                                                                                                   cGGAAATTGTGGCTGGGTTCTGCGCGGGCAGGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACCTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                    <  2:3548314/150‑1 (MQ=255)
                                                                                                                                    ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCGGCATACATCCTGTGGGAGCGGGCCTGCCCGCGACGACGTCGGTGCCGGCTTTGCCGATTCCGGGGGTGCATCGAATGCTTCggg                   >  2:278939/1‑150 (MQ=38)
                                                                                                                                         tttttGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCGTCTGGCATgg              >  2:1724099/1‑150 (MQ=255)
                                                                                                                                          ttttGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCATCACCGGTCTGTGGGCTGCATACATCCTGTCGGAGCGGGCAAGCCCGCGAAGACCACGGTGCAGGCTTTGCACATTCCGGGGGTGCATCGAAAGCTGCAGGCATGGc             >  2:4995960/1‑150 (MQ=38)
                                                                                                                                              gcggggTTCTTCGGGGGCATGCCCGCTCCCACCGGTCCATCACAGGTCGGTGGGCTGCATACCTCCTGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGc         <  2:4995940/147‑1 (MQ=255)
                                                                                                                                                tGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCCTGCCCCCGCAGAAGTCCGGGCAGGCTTTGCAGAGTCCGGGGGTGCATCGAATGCGTCTGGCATGGCCTGCgc       >  1:2191577/1‑149 (MQ=255)
                                                                                                                                                tGGGTTCTTCGCGGGCATGCCCGCTACCACAGGTACATCACAGGTCTGTGGGCTGCATAAAAACTGGGGGAGCCGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGa       >  2:485826/1‑150 (MQ=255)
                                                                                                                                                     tcttcGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccccagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgac  <  2:3181048‑M1/150‑123 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3949730‑3950028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.