New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5021055187 (1.140)13 (0.080) 12/252 NT 6.7% intergenic (‑229/+31) gabD‑II/PP_4423 succinate‑semialdehyde dehydrogenase/hypothetical protein
?NC_002947 = 5021060 187 (1.210)intergenic (‑234/+26) gabD‑II/PP_4423 succinate‑semialdehyde dehydrogenase/hypothetical protein

Only 100 of 236 total aligned reads displayed.

AGCCCGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGTGCCACACCTG  >  NC_002947/5020910‑5021204
                                                                                                                                                 |                                                                                                                                                     
aGCCCGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACtt                                                                                                                                                   >  2:1748644/1‑150 (MQ=255)
aGCCCGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACtt                                                                                                                                                   <  2:1193377/150‑1 (MQ=255)
 gCCCGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTg                                                                                                                                                  >  1:1744223/1‑150 (MQ=255)
  cccGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGg                                                                                                                                                 >  2:3921768‑M2/1‑149 (MQ=255)
         gcgcAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAATCCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGgcagcctt                                                                                                                                          <  1:228706‑M2/150‑9 (MQ=255)
         gcgcAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAACAAGGCTGCACTTGgcagcctt                                                                                                                                          >  1:5297966‑M2/1‑142 (MQ=255)
         gcgcAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCcaagtgcagcctt                                                                                                                                          <  2:2440374‑M1/150‑14 (MQ=255)
           gcAGTATTACTTTGATTTTTTCTCAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATATGAAATGTTTGGAACAAAACCAATTATGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCttgt                                                                                                                                        <  1:3257746/150‑1 (MQ=255)
           gcAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCttgt                                                                                                                                        <  1:1957985/150‑1 (MQ=255)
               tattACTGTGATTTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATTCGATTTCAGGTCTTTAGTTTCATAAGAAATGATTGGAACAAAACCAATTAGTTGTAGATAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGaa                                                                                                                                    <  1:3017742/147‑1 (MQ=255)
               tAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCttgtt                                                                                                                                       >  2:5206157/1‑147 (MQ=255)
               tAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGaa                                                                                                                                    <  2:2028790/150‑1 (MQ=255)
                 aTACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCCAAGTgcagccttttttgttt                                                                                                                                  >  2:3105943‑M2/1‑134 (MQ=255)
                  tACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAggg                                                                                                                                 >  1:4620657/1‑150 (MQ=255)
                  tACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAggg                                                                                                                                 >  1:2946583/1‑150 (MQ=255)
                  tACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGAACTTGGCAGCCTTGTTGAAggg                                                                                                                                 >  1:4887767/1‑150 (MQ=255)
                    cTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGc                                                                                                                               >  2:3501461/1‑150 (MQ=255)
                     tgtgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTGTGTAGGTGCATAAGAAATGATTGGAACAAATGCAATTAGGTGTAGAAAAACAATAAAGGCTGCACTTGGCAGCCTTGTTGTAGGGGct                                                                                                                              >  2:2705322/1‑149 (MQ=255)
                     tgtgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCa                                                                                                                              >  2:681496/1‑150 (MQ=255)
                       tgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGTACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGa                                                                                                                            >  2:5112466/1‑150 (MQ=255)
                       tgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCcaagtgcagcctttttt                                                                                                                                      >  1:1321015‑M1/1‑123 (MQ=255)
                       tgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGa                                                                                                                            >  1:2949828/1‑150 (MQ=255)
                       tgATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTAGGCAGCCTTGTTGAAGGGGCAGa                                                                                                                            >  1:4593221/1‑150 (MQ=255)
                         aTGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATg                                                                                                                          >  1:1772940/1‑150 (MQ=255)
                            ttttCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGttt                                                                                                                       >  2:1316255/1‑150 (MQ=255)
                              ttCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTaa                                                                                                                     >  2:2537091/1‑150 (MQ=255)
                               tCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATACGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCCAAGTgcagccttttttgtttttctacacctaatt                                                                                                                    >  2:1463633‑M2/1‑120 (MQ=255)
                               tCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAag                                                                                                                    <  1:35168/150‑1 (MQ=255)
                               tCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAag                                                                                                                    <  1:3669170/150‑1 (MQ=255)
                                cacaGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAaga                                                                                                                   <  2:4842436/150‑1 (MQ=255)
                                cacaGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAaga                                                                                                                   <  1:1802123/150‑1 (MQ=255)
                                 acaGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAagag                                                                                                                  >  1:1925046/1‑150 (MQ=255)
                                         gcAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTtctc                                                                                                          >  1:666118/1‑150 (MQ=255)
                                          cAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCa                                                                                                         <  2:2975129/150‑1 (MQ=255)
                                            gCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAATACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGc                                                                                                       <  1:2713549/150‑1 (MQ=255)
                                            gCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGc                                                                                                       <  2:4382556/150‑1 (MQ=255)
                                                 ccTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGaa                                                                                                  <  2:777418/150‑1 (MQ=255)
                                                  cTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAAc                                                                                                 >  2:2902134/1‑150 (MQ=255)
                                                   tGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACt                                                                                                >  2:1134361/1‑150 (MQ=255)
                                                         aTTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGAtt                                                                                          >  2:4898214/1‑150 (MQ=255)
                                                         aTTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGAtt                                                                                          >  1:854177/1‑150 (MQ=255)
                                                          tttATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATtg                                                                                         >  2:3415314/1‑150 (MQ=255)
                                                          tttATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATtg                                                                                         >  2:2461559/1‑150 (MQ=255)
                                                              tCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTc                                                                                     >  2:3746761/1‑150 (MQ=255)
                                                              tCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTc                                                                                     >  1:2056354/1‑150 (MQ=255)
                                                               cAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCa                                                                                    >  2:1437057/1‑150 (MQ=255)
                                                                  agaTGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGtt                                                                                                                        >  1:759174/1‑111 (MQ=255)
                                                                     tGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCAc                                                                              >  2:4392300/1‑150 (MQ=255)
                                                                     tGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCAc                                                                              >  2:4621337/1‑150 (MQ=255)
                                                                        gATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGc                                                                           >  1:1009407/1‑150 (MQ=255)
                                                                        gATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGc                                                                           >  1:5059120/1‑150 (MQ=255)
                                                                        gATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACCGCGATTGTGTCACCGCACTGc                                                                           >  2:4937553/1‑150 (MQ=255)
                                                                            tCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACaa                                                                       <  1:5192502/150‑1 (MQ=255)
                                                                            tCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACaa                                                                       >  2:3762254/1‑150 (MQ=255)
                                                                             cAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAg                                                                      <  1:4865278/150‑1 (MQ=255)
                                                                              aGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGc                                                                     >  2:3869899/1‑150 (MQ=255)
                                                                                 tCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGcccc                                                                  <  2:1074639/150‑1 (MQ=255)
                                                                                   tGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCgg                                                                <  1:4193070/150‑1 (MQ=255)
                                                                                    gTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTGGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGc                                                                     <  2:1787566/144‑1 (MQ=255)
                                                                                    gTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCggg                                                               >  2:4167695/1‑150 (MQ=255)
                                                                                     tAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGa                                                              >  1:3862915/1‑150 (MQ=255)
                                                                                               aGAAATGATTGGAACAAAACCAATTAGGTTTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTATGAGATTTTCTCAGCCAGAACTGAGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACggca                                                    <  2:4541684/150‑1 (MQ=255)
                                                                                               aGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACCGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACggca                                                    <  1:4937553/150‑1 (MQ=255)
                                                                                                gAAATGATTGGAACAAAAGCAATTAGGTGTAGAAATACAATATAGGCTGCACTTGGCAGCCTTGTTGAAGGGGTAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCTCATGCCCCGGGAAGTGACgggtg                                                   >  2:4485124/1‑147 (MQ=255)
                                                                                                gAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACggcag                                                   >  1:1381752/1‑150 (MQ=255)
                                                                                                       ttGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCaagaa                                            >  1:2644684/1‑150 (MQ=255)
                                                                                                        tGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGAt                                                                                                                           <  2:4507388/70‑1 (MQ=255)
                                                                                                        tGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGAt                                                                                                                           >  1:4507388/1‑70 (MQ=255)
                                                                                                           aaCAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCacttggcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaa                                              <  2:214371‑M1/144‑106 (MQ=255)
                                                                                                           aaCAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGcc                                        <  1:3450559/150‑1 (MQ=255)
                                                                                                           aaCAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGcc                                        >  2:4134096/1‑150 (MQ=255)
                                                                                                            aCAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCg                                       >  1:571901/1‑150 (MQ=255)
                                                                                                             cAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGt                                      >  1:1798251/1‑150 (MQ=255)
                                                                                                                aaCCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGAt                                                                                           <  1:1050497/94‑1 (MQ=255)
                                                                                                                 aCCAATTAGGTGTAGAAAAACAAAAAAGGCTGCacttggcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactg                                  >  2:2500157‑M1/1‑33 (MQ=255)
                                                                                                                  ccAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGt                                 <  1:3906692/150‑1 (MQ=255)
                                                                                                                  ccAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGt                                 >  1:3330068/1‑150 (MQ=255)
                                                                                                                     aTTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTgg                              >  1:349254/1‑150 (MQ=255)
                                                                                                                     aTTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTgg                              <  2:2144896/150‑1 (MQ=255)
                                                                                                                           tgtAGAAAAACAATAATGGCTGCAGTTGGCAGCCTTGTTGAAGGGGGAGATGTTTAAGAGATTTTGTCTGCCAGAACTGGGTTTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCAGGTTgggggttg                        >  2:1905419/1‑145 (MQ=255)
                                                                                                                           tgtAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCGCAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTg                        >  1:3808182/1‑150 (MQ=255)
                                                                                                                            gtagtaAAACAAAAATGGCTGCAGTTGGCAGCGTTGTTGAAGGGGCAGTTGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGt                       >  2:574354/1‑150 (MQ=255)
                                                                                                                            gtAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGt                       <  2:1772940/150‑1 (MQ=255)
                                                                                                                            gtAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTGGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGt                       >  2:4280996/1‑150 (MQ=255)
                                                                                                                             tAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTa                      >  2:3354210/1‑150 (MQ=255)
                                                                                                                                aaaaaCAAAAAAGGCTGCacttggcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactgtgaaaacatcacagt                   >  1:2271529‑M1/1‑18 (MQ=255)
                                                                                                                                aaaaaCAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTc                   <  1:5112466/150‑1 (MQ=255)
                                                                                                                                 aaaaCAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCg                  <  1:2279516/150‑1 (MQ=255)
                                                                                                                                  aaaCAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCATATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCgg                 <  1:161599/150‑1 (MQ=255)
                                                                                                                                  aaaCAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCgg                 <  1:2537091/150‑1 (MQ=255)
                                                                                                                                   aaCAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGt                <  2:228706/150‑1 (MQ=255)
                                                                                                                                      aaaaaaGGCTGCACTTGgcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactgtgaaaacatca                       <  2:1321015‑M2/140‑124 (MQ=255)
                                                                                                                                       aaaaaGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGt            <  2:4872240/150‑1 (MQ=255)
                                                                                                                                       aaaaaGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGt            <  1:4276362/150‑1 (MQ=255)
                                                                                                                                        aaaaGGCTGCACTTGgcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactgtgaa                              >  2:1139838‑M2/1‑15 (MQ=255)
                                                                                                                                        aaaaGGCTGCACTTGgcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactgtgaa                              <  1:1139838‑M2/131‑117 (MQ=255)
                                                                                                                                          aaGGCTGCcaagtgcagccttttttgtttttctacacctaattggttttgttccaatcatttcttatgcacctacagacctgaaatcgcatctctgataaatgacgcaggaaagctgcgcaactgtgaaaacatcacagtattactgcgc         >  1:3448486‑M1/1‑8 (MQ=255)
                                                                                                                                            ggCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGTGCcac       <  1:4004688/150‑1 (MQ=255)
                                                                                                                                              cTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGTGCCacac     <  1:118538/150‑1 (MQ=255)
                                                                                                                                                 cACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGTGCCACACCTg  <  2:1620304/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
AGCCCGTGTGCGCAGTAATACTGTGATGTTTTCACAGTTGCGCAGCTTTCCTGCGTCATTTATCAGAGATGCGATTTCAGGTCTGTAGGTGCATAAGAAATGATTGGAACAAAACCAATTAGGTGTAGAAAAACAAAAAAGGCTGCACTTGGCAGCCTTGTTGAAGGGGCAGATGTTTAAGAGATTTTCTCAGCCAGAACTGCGATTGTGTCACCGCACTGCACAAGCCCCGGGAAGTGACGGCAGGCAAGAAGGCCGTCACGTTGGGCCTTGTATTCGGTAGGTGCCACACCTG  >  NC_002947/5020910‑5021204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.