New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 393033697 (0.590)18 (0.140) 7/208 NT 18.6% intergenic (+46/‑94) peaE/PP_3464 phenylacetaldehyde dehydrogenase/hypothetical protein
?NC_002947 5121586 = 82 (0.640)intergenic (+49/+82) PP_4505/PP_4506 sensor histidine kinase/nitroreductase family protein

Only 100 of 136 total aligned reads displayed.

GCGGAGCGCCATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTCAGCG  >  NC_002947/5121439‑5121735
                                                                                                                                                   |                                                                                                                                                     
gCGGAGCGCCATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                                                     <  2:2282166/150‑1 (MQ=255)
  ccgtttggtggctacaagatgtctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtaaacccgctcctacagggca                                                                                                                                                   <  1:481601‑M2/5‑3 (MQ=255)
   gAGCGCCATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGAt                                                                                                                                                  >  2:2868211/1‑150 (MQ=255)
        ccATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGa                                                                                                                                             >  2:4438618/1‑150 (MQ=255)
        ccATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGa                                                                                                                                             >  1:5130601/1‑150 (MQ=255)
        ccATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGa                                                                                                                                             >  1:5130580/1‑150 (MQ=255)
         cATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCGAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGAt                                                                                                                                            >  1:835382/1‑150 (MQ=255)
         cATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGAt                                                                                                                                            >  2:4879364/1‑150 (MQ=255)
          aTGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATg                                                                                                                                           <  1:5434590/150‑1 (MQ=255)
             gCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtg                                                                                                                                        <  1:5363479/150‑1 (MQ=255)
             gCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtg                                                                                                                                        <  1:1434143/150‑1 (MQ=255)
              cGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtgt                                                                                                                                       <  2:5182467/150‑1 (MQ=255)
               ggTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtgtt                                                                                                                                      <  1:345111/150‑1 (MQ=255)
                 tAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtgttgt                                                                                                                                    <  1:3317826/150‑1 (MQ=255)
                 tAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtgttgt                                                                                                                                    <  1:2193008/150‑1 (MQ=255)
                 tAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCtgttgt                                                                                                                                    <  2:853470/150‑1 (MQ=255)
                  aGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTa                                                                                                                                   <  2:1738830/150‑1 (MQ=255)
                     tgtctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtgccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGa                                                                                                                                <  1:2154937‑M2/24‑1 (MQ=255)
                     tgtctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGa                                                                                                                                <  1:49391‑M2/24‑1 (MQ=255)
                      gtctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtaaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAg                                                                                                                               >  2:1308995‑M2/126‑150 (MQ=255)
                       tctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtgccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGc                                                                                                                              <  1:4209709‑M2/26‑1 (MQ=255)
                       tctggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGc                                                                                                                              <  1:2238959‑M2/26‑1 (MQ=255)
                       gATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGc                                                                                                                              <  1:4491405/150‑1 (MQ=255)
                         tggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCgg                                                                                                                            <  2:4885672‑M2/28‑1 (MQ=255)
                         tggcgttggtcgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCgg                                                                                                                            <  2:2590247‑M2/28‑1 (MQ=255)
                         tGCTGGAGCATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTCCAGGGGATGTGGATGCTGTTGTAGGAGCgg                                                                                                                            <  2:4949432/150‑1 (MQ=255)
                         tGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCgg                                                                                                                            >  2:1514908/1‑150 (MQ=255)
                         ccgcggacggcgccggtgctggaaacggctgatttcgttagtagctggggtgagtaacctggccttgggctgattcatgcatcaaggcatccGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCgg                                                                                                                            >  1:3243862‑M1/93‑150 (MQ=255)
                          gCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCggg                                                                                                                           <  1:332855/150‑1 (MQ=255)
                          gCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCggg                                                                                                                           <  1:4606260/150‑1 (MQ=255)
                            tGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGc                                                                                                                              >  1:3787805/1‑145 (MQ=255)
                            tGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGc                                                                                                                              <  2:3787805/145‑1 (MQ=255)
                            cggacggcgccggtgctggaaacggctgatttcgttagtagctggggtgagtaacctggccttgggctgattcatgcatcaaggcatccGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGtt                                                                                                                         <  2:1709973‑M1/61‑1 (MQ=255)
                             ggAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTc                                                                                                                        <  1:2230653/150‑1 (MQ=255)
                              gagaATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCa                                                                                                                       >  2:148566/1‑150 (MQ=255)
                                 aaTCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCAccc                                                                                                                    <  1:2076510/150‑1 (MQ=255)
                                   cgtgagatgggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtaaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCgg                                                                                                                            <  2:610606‑M2/28‑1 (MQ=255)
                                   cgccggtgctggaaacggctgatttcgttagtagctggggtgagtaacctggccttgggctgattcatgcatcaaggcatccGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCcgc                                                                                                                  >  1:1709973‑M1/83‑150 (MQ=255)
                                    catcCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCcgcg                                                                                                                 <  2:4930956/150‑1 (MQ=255)
                                    catcCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCcgcg                                                                                                                 <  2:2078978/150‑1 (MQ=255)
                                        gtgctggaaacggctgatttcgttagtagctggggtgagtaacctggccttgggctgattcatgcatcaaggcatccGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                                             >  1:4592209‑M1/78‑150 (MQ=255)
                                        caccGGGTGGGTTTGTGGCCAGGCTGGAGTGGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                                             <  1:4804084/150‑1 (MQ=255)
                                        cacaGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAATGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAagt                                                                                                             >  2:3282114/1‑149 (MQ=255)
                                        cacaGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAATCCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                                             >  2:3282126/1‑150 (MQ=255)
                                        cacaGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCAc                                                                                                                      <  2:95446/141‑1 (MQ=255)
                                        cacaGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                                             >  1:862695/1‑150 (MQ=255)
                                        cacaGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                                             >  1:863442/1‑150 (MQ=255)
                                           gggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCGGGTTTAcc                                                                                                                     <  1:1176531‑M2/35‑1 (MQ=255)
                                           gggttcagcggccatcgagcattacacggagctgaaatcggtgttgatcaagctctgatcctttttcctgtaccggcctcttcgcgggtgaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCGGGTTTAcc                                                                                                                     >  2:1176531‑M2/105‑139 (MQ=255)
                                               tgggtTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGa                                                                                                      >  1:3054518/1‑150 (MQ=255)
                                                    ttGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCt                                                                                                 <  2:4476929/150‑1 (MQ=255)
                                                     tgtgGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCTGTGGATGCTGTTGGAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCtt                                                                                                >  1:523341/1‑150 (MQ=255)
                                                      gtgGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTg                                                                                               <  2:1037230/150‑1 (MQ=255)
                                                      gtgGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGGTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTg                                                                                               <  2:1037241/150‑1 (MQ=255)
                                                        ggCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGAt                                                                                             <  2:990432/150‑1 (MQ=255)
                                                          cctggCGGGAGGTGCCCGGGGCTGGAGCGGCCGGCAGTTGCGGGGGTGCAACGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGTTGTGGATGGTGTTGTAGGCGGGGGTCCACCCGCGAAGAGGCCGGATGCCTTGATGc                                                                                           <  1:148566/147‑1 (MQ=255)
                                                            cggCTGGTGGTGCCCTTGGCTGGCGCGGCAGGCAGTTGAGGGGGTGCAACGGCGCCCGGCCTCTGCGCGGGTAACCCCGCTCCTACCGGGGTTGTGGTTGCTGTTGTAGGAGCGGGTACACCCGCGAAGAGGCCGGATGCCTTGATGCAt                                                                                         <  1:2543809/149‑1 (MQ=255)
                                                                  gAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCa                                                                                   <  2:2390738/150‑1 (MQ=255)
                                                                  gAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCa                                                                                   <  1:4946674/150‑1 (MQ=255)
                                                                     ttGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCAt                                                                                         >  1:2145045/1‑141 (MQ=255)
                                                                        cccTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCcgc                                                                                                                  >  1:929735/1‑113 (MQ=255)
                                                                        cccTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCTAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCaa                                                                             <  1:1118106/150‑1 (MQ=255)
                                                                        cccTTGGCGGGAGCGGCTGGCTGTTGATGGGGTGCAATGGCGCCCGGCATCTTCGCGGGTAAACCCGCTCCTAATGGGGTTGTGTTTGCTTTTGTCGGCGCGGGTTAACCCGGGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCaa                                                                             <  1:1118479/150‑1 (MQ=255)
                                                                         ccTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAg                                                                            >  2:3869375/1‑150 (MQ=255)
                                                                              gCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAg                                                                       >  1:3771538/1‑150 (MQ=255)
                                                                                tGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGt                                                                     >  1:1319004/1‑150 (MQ=255)
                                                                                tGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGt                                                                     <  2:3662338/150‑1 (MQ=255)
                                                                                 ggAGCGGCAGGCAGTTGATGGGGTGCAACGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGtt                                                                    <  1:2668359/150‑1 (MQ=255)
                                                                                   aGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTAc                                                                  <  2:863442/150‑1 (MQ=255)
                                                                                   aGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTAc                                                                  <  2:862695/150‑1 (MQ=255)
                                                                                          ggcagTGGATGGGGGGCAAAGGCGCCAGGCCTCTTCGCGGGTAACCCCGCTCCTACCGGGGATGTGGCGGGTGTTGTCGGCGCGGGTTCACCCGCGACGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCAcccc                                                           <  1:1389216/150‑1 (MQ=255)
                                                                                            aagctctgatcctttttcctgtaccggcctcttcgcgggtaaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGc                                                                                                                              <  1:4276383‑M2/26‑1 (MQ=255)
                                                                                            aagctctgatcctttttcctgtaccggcctcttcgcgggtaaacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGc                                                                                                                              >  2:4276383‑M2/56‑81 (MQ=255)
                                                                                                   tGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGTGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTaa                                                  <  1:841583/150‑1 (MQ=255)
                                                                                                      ggTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGAATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGa                                               <  1:3796950/150‑1 (MQ=255)
                                                                                                           aaaGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCa                                          <  2:2724272/150‑1 (MQ=255)
                                                                                                           aaaGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCa                                          <  1:5318329/150‑1 (MQ=255)
                                                                                                           aaaGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCa                                          <  2:2724202/150‑1 (MQ=255)
                                                                                                           aaaGGCGCCAGGCCTCTTCGCGGGTAAAACCCCTCCGACAGGGGATGTGGATGCTGTTGTTGGAGCGGGTTCACCCGCGAAGAGGCCGGAAGCCATGATGCAAGAATCAGCCCAACGCCAGGTTACAAAACCCACCAACTAAAAAAAtaa                                          >  1:4184292/1‑148 (MQ=25)
                                                                                                               gcgcCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCg                                      >  2:3308496/1‑150 (MQ=255)
                                                                                                                   cAGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGTTGTGGATGCTGTTGTAGTCGGGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTc                                  <  1:2433493/150‑1 (MQ=39)
                                                                                                                    aGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTcc                                 <  1:2194678/150‑1 (MQ=255)
                                                                                                                     ggcctcttcgcgggtaaacccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCa                                <  2:1447162‑M2/120‑1 (MQ=255)
                                                                                                                                gggtaaacccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCCCCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAGATCAGCCGTTTCCAGCACCggcgct                     <  2:3942899‑M2/131‑2 (MQ=255)
                                                                                                                                  gtaaacccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGt                   >  1:678264‑M2/18‑150 (MQ=255)
                                                                                                                                   taaacccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTc                  >  1:696518‑M2/17‑150 (MQ=255)
                                                                                                                                   taaacccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTc                  >  1:696522‑M2/17‑150 (MQ=255)
                                                                                                                                       cccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCAACCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCcgcg              <  2:5294896‑M2/138‑1 (MQ=255)
                                                                                                                                        ccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCgg             >  2:2751746‑M2/12‑150 (MQ=255)
                                                                                                                                        ccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCgg             >  1:4860165‑M2/12‑150 (MQ=255)
                                                                                                                                        ccgctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCgg             >  2:2002519‑M2/12‑150 (MQ=255)
                                                                                                                                          gctcctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAg                                                                       <  1:1369418‑M2/81‑1 (MQ=255)
                                                                                                                                            tcctaccGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCg         <  2:1920856‑M2/143‑1 (MQ=255)
                                                                                                                                              ctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGt       >  2:4537435‑M2/6‑150 (MQ=255)
                                                                                                                                              ctacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGt       <  2:1319004‑M2/145‑1 (MQ=255)
                                                                                                                                               tacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTc      >  2:3598016‑M2/5‑150 (MQ=255)
                                                                                                                                               tacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTc      >  2:785446‑M2/5‑150 (MQ=255)
                                                                                                                                               tacaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTc      >  1:360384‑M2/5‑150 (MQ=255)
                                                                                                                                                acaGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTCa     >  2:1020698‑M2/4‑150 (MQ=255)
                                                                                                                                                  aGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTCAGc   <  2:3054518‑M2/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCGGAGCGCCATGGCGGTAGCCTGATGCTGGAGAATCATCCACAGGGTGGGTTTGTGGCCAGGCTGGAGTTGCCCTTGGCTGGAGCGGCAGGCAGTTGATGGGGTGCAAAGGCGCCAGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATGTGGATGCTGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGATGCCTTGATGCATGAATCAGCCCAAGGCCAGGTTACTCACCCCAGCTACTAACGAAATCAGCCGTTTCCAGCACCGGCGCCGTCCGCGGTTCGGTCAGCG  >  NC_002947/5121439‑5121735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.