BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5673611	58 (0.350)	12 (0.090)	8/220	NT	16.9%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5673648	70 (0.520)	12 (0.090)	8/220	NT	16.9%	intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein

Only 100 of 143 total aligned reads displayed.

GCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAA  >  NC_002947/5673502‑5673792

gCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttc                                                                                                                                               >  1:266002‑M2/1‑147 (MQ=255)

gCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttc                                                                                                                                               >  1:265921‑M2/1‑147 (MQ=255)

gCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttc                                                                                                                                               >  1:3995490‑M2/1‑147 (MQ=255)

 ctctgatccagcacagacgggcgatatggggccgggccggagattacgcgctcggccggtgtacggtaaaggcatgcatgatcgaGGTGGGAGCGGGCGTGCCCGCGAAGGGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTcg                                                                                                                                              >  1:4366331‑M1/86‑150 (MQ=255)

   aGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcg                                                                                                                                            >  2:2221275‑M2/1‑144 (MQ=255)

    gcggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCCAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgg                                                                                                                                           >  2:940823‑M2/1‑143 (MQ=255)

    gcggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgg                                                                                                                                           >  2:5286931‑M2/1‑143 (MQ=255)

    gcggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgg                                                                                                                                           >  1:4215466‑M2/1‑143 (MQ=255)

      ggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggc                                                                                                                                         >  1:3488494‑M2/1‑141 (MQ=255)

      atccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGc                                                                                                                                         >  2:3677966‑M1/81‑150 (MQ=255)

      atccagaacagacgggcgagatgtggcatggccggagattacgcgctcggccggtgtacggtcaaggcaggccgtatcgcTGTGGGAGCGGGCGTGCCCGCGACGGGAGCACCCCGAGCGTGGGCACCGGCTTCGCCGGggttcgcagag                                                                                                                                         <  2:4366331‑M1/70‑5 (MQ=255)

       gcgcAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggca                                                                                                                                        >  1:1328569‑M2/1‑140 (MQ=255)

        ccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                                                                       >  1:2122717‑M1/79‑150 (MQ=255)

         gcAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacg                                                                                                                                      <  2:3595399‑M2/150‑13 (MQ=255)

         gcAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacg                                                                                                                                      <  2:3593197‑M2/150‑13 (MQ=255)

          cAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgc                                                                                                                                     >  2:5033438‑M2/1‑137 (MQ=255)

          agaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     >  1:673687‑M1/77‑150 (MQ=255)

          agaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     >  1:4464829‑M1/77‑150 (MQ=255)

                tatCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctc                                                                                                                               >  2:4558197‑M2/1‑131 (MQ=255)

                             tggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCAGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     >  2:2178237‑M1/58‑131 (MQ=255)

                             tggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCAGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     >  2:2178262‑M1/58‑131 (MQ=255)

                             tggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCAGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     <  1:2178262‑M1/74‑1 (MQ=255)

                             tggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGGGCGTGCCAGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc                                                                                                                                     <  1:2178324‑M1/74‑1 (MQ=255)

                             ctgctgCGATCCACCCAAGCCTTATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAat                                                                                                                  <  1:420198/150‑1 (MQ=255)

                              tgctgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTTGCACCGGCTTCGCCGGTTTTAGCGGGCACGCCCGCTCCCCCATCGATAatg                                                                                                                 >  2:1167207/1‑150 (MQ=255)

                              tgctgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCGTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAACGATAatg                                                                                                                 >  2:4162506/1‑150 (MQ=255)

                                 tgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGAAAattcct                                                                                                              >  2:747908/1‑146 (MQ=255)

                                 tgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGGGGGAGCGGGCGGGCGCGCGCAGAGGGCAACCCGATCGTTTGCACCGGCTTCGGCGGTGGTCGGGGGGACGCCCGCGCCCACACAGATAattcag                                                                                                              >  1:2047664/1‑149 (MQ=255)

                                   cGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATAGGTGGCACCCGCGTAGCCGGTGTTAGCGGGGACGCCCCCTCCCACATCGAAAaagcatgc                                                                                                            >  1:1694842/1‑150 (MQ=37)

                                         ccccAAGCCTGATGTGCCCGCAAAACTCTTTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTAc                                                                                                      <  1:5429632/149‑1 (MQ=255)

                                            cAAGCCGGATGTGCCCGAAAAACTCTTGGTCTTGCGGGTTCTTGTGGGAGCGGGCGGGCCCGCTAAGAGAGCAACCCGATCTTTGGCACCGGCTTCGCGGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGt                                                                                                   <  1:639961/150‑1 (MQ=37)

                                                  tGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCACCCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgc                                                                                                                                     <  1:3226778‑M2/110‑14 (MQ=255)

                                                         cccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAgc                                                                                      <  2:5430625/150‑1 (MQ=255)

                                                         cccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAgc                                                                                      <  2:2720001/150‑1 (MQ=255)

                                                          ccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATCGGTGGCACCCGCTTCGCCGGTGTTAGCGGGCACGCCCGCGCCCACAACGATAATGCAAGCCGTTAACGTACACCCGCCCAgcg                                                                                     >  1:440743/1‑150 (MQ=25)

                                                           cGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAAAGCATGCCTTTACCGTACACCCGCCGAgccc                                                                                    >  2:4211518/1‑148 (MQ=255)

                                                           cGCAAAACTCAGTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAgcgc                                                                                    <  2:4086711/150‑1 (MQ=255)

                                                             cAAAACTCCTTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGt                                                                                  <  2:2426202/150‑1 (MQ=255)

                                                                aaCTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCCATCGTTGGCACCCGCGTCGCCGGTGTTCGCGGGCCCGCCCCCTCCCACAACCAAAAAGCAAGCCATTACCGTAGATCGGAAGAgcgtcgggt                                                                               >  2:4260999/1‑144 (MQ=21)

                                                                    cATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTcc                                                                           <  2:1965176/150‑1 (MQ=255)

                                                                           ttGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATc                                                                                                                        >  2:5297023/1‑98 (MQ=255)

                                                                           ttGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATc                                                                                                                        <  1:5297023/98‑1 (MQ=255)

                                                                           ttGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATg                                                                    <  2:3334764/150‑1 (MQ=255)

                                                                              cgcgGTCTGGTGGGAGCGGGCGTGCCCGCGACGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCca                                                                 <  1:5032151/150‑1 (MQ=255)

                                                                                     ttGTGGGAGCGGGCGTGCCCGCGAAGAGAGCACCCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcggcagatgcgcc                                                          <  2:4674418‑M2/150‑89 (MQ=255)

                                                                                     ttGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCg                                                          >  2:2073646/1‑150 (MQ=255)

                                                                                      TGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGc                                                         >  2:3126528‑M1/1‑150 (MQ=255)

                                                                                        tcttcGCGGGCACGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGccc                                                       <  1:4806233‑M1/145‑1 (MQ=255)

                                                                                        TGGGAGCGGGCGTGCCCGCGTAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGccc                                                       >  1:4958504‑M1/1‑150 (MQ=255)

                                                                                        TGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATGGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGccc                                                       >  1:1016449‑M1/1‑150 (MQ=255)

                                                                                         GGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCg                                                      <  2:3625201‑M1/150‑1 (MQ=255)

                                                                                         GGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACAAATCGCCCg                                                      <  1:4780028‑M1/150‑1 (MQ=255)

                                                                                                 gCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttg                                              <  1:2510829‑M2/150‑101 (MQ=255)

                                                                                                  gGTGCCCGCGAAGATAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTGCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTg                                             >  1:167141‑M1/2‑150 (MQ=255)

                                                                                                       ccGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgc                                        <  2:1468514‑M2/150‑107 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCtt                                                                                                         <  2:4745348‑M1/85‑1 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        >  1:3445360‑M1/1‑150 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        <  2:581090‑M1/150‑1 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        <  2:876296‑M1/150‑1 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        <  2:4231936‑M1/150‑1 (MQ=255)

                                                                                                       CCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        <  2:4231935‑M1/150‑1 (MQ=255)

                                                                                                        cgcgAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgct                                       <  2:3973636‑M2/150‑108 (MQ=255)

                                                                                                        cgcgAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgct                                       <  1:2911087‑M2/150‑108 (MQ=255)

                                                                                                        CGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCct                                       <  1:4210119‑M1/150‑1 (MQ=255)

                                                                                                         GCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg                                      <  2:1875238‑M1/150‑1 (MQ=255)

                                                                                                         GCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCctg                                      <  2:1875285‑M1/150‑1 (MQ=255)

                                                                                                               agagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTc                                <  1:3595399/150‑1 (MQ=255)

                                                                                                                gagCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCt                                              >  1:3611625/1‑135 (MQ=255)

                                                                                                                 agCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTAcc                                                                                                     <  1:957561/79‑1 (MQ=255)

                                                                                                                 agCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGt                              >  2:3871697/1‑150 (MQ=255)

                                                                                                                 agCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCACCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGt                              >  1:4626583/1‑150 (MQ=255)

                                                                                                                    aaCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCt                                                   >  1:640783/1‑126 (MQ=255)

                                                                                                                    aaCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCt                                                   <  2:640783/126‑1 (MQ=255)

                                                                                                                    aaCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTg                           >  2:2450577/1‑150 (MQ=255)

                                                                                                                     aCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGc                          <  1:1071033/150‑1 (MQ=255)

                                                                                                                     aCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGc                          >  1:4708199/1‑150 (MQ=255)

                                                                                                                     aCCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGc                          >  2:768993/1‑150 (MQ=255)

                                                                                                                      cccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATACTGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc                         >  2:2358337/1‑150 (MQ=255)

                                                                                                                      cccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc                         <  2:5071380/150‑1 (MQ=255)

                                                                                                                       ccGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATCTCGCCCGGCTGTTCTGGATCCTGCTGCTCGTTTGCCt                        >  2:2789946/1‑150 (MQ=255)

                                                                                                                        cGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGccc                                                       <  1:3950073/118‑1 (MQ=255)

                                                                                                                         gATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGa                      >  2:1828929/1‑150 (MQ=255)

                                                                                                                         gATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGa                      >  2:3013575/1‑150 (MQ=255)

                                                                                                                           ccgcgaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGc                    >  2:5242450/8‑150 (MQ=255)

                                                                                                                             gcgaacaccggCGAAGCCGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgctcgcccagcgatagccgtagcc                  <  2:4597713‑M2/145‑129 (MQ=255)

                                                                                                                                ggCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGtt               <  2:4449524/150‑1 (MQ=255)

                                                                                                                                 gCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTg              <  2:3120390/150‑1 (MQ=255)

                                                                                                                                 gCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTg              >  1:2675167/1‑150 (MQ=255)

                                                                                                                                  cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc                         <  2:128454/138‑1 (MQ=255)

                                                                                                                                  cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGcc                         >  1:128454/1‑138 (MQ=255)

                                                                                                                                  cACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGc                    <  2:4407362/143‑1 (MQ=255)

                                                                                                                                   aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGc                                                         <  1:2305668/105‑1 (MQ=255)

                                                                                                                                   aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGc                                                         >  2:2305668/1‑105 (MQ=255)

                                                                                                                                   aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGc            >  1:4267235/1‑150 (MQ=255)

                                                                                                                                   aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGc            >  1:3594959/1‑150 (MQ=255)

                                                                                                                                      ggCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        >  2:5049018/1‑119 (MQ=255)

                                                                                                                                      ggCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATcc                                        <  1:5049018/119‑1 (MQ=255)

                                                                                                                                      ggCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGctct         <  1:1884903/150‑1 (MQ=255)

                                                                                                                                        cTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTgg       <  2:3253108/150‑1 (MQ=255)

                                                                                                                                             ccGGTGttcgcgggcacgcccgctcccacaagaccgcgcaagacaatgagttttgcgggcacatcaggcttgggtggatcgcagcagatgcgcctcgatatccttgcgccgctcgcccagcgatagccgtagccccggatggcgcaggca  >  1:1468514‑M2/1‑6 (MQ=255)

GCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAA  >  NC_002947/5673502‑5673792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.