New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1304426 =	34 (1.350)	3 (0.140)	3/116	2.1	9.6%	coding (593/909 nt)	oppC	oligopeptide ABC transporter permease
	?	NC_000913	1304482 =	27 (1.220)					coding (649/909 nt)	oppC	oligopeptide ABC transporter permease
Rejected: Frequency below/above cutoff threshold.

CCACACCGAGTACATTCGGCACAATGTGGCGAATAACAATGCCCGATGTCGATACACCGCCAACTTGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1304497‑1304426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgccgAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTTGAATC  >  NC_000913/1304482‑1304546                                                                                                                                           CCACACCGAGTACATTCGGCACAATGTGGCGAATAACAATGCCCGATGTCGATACACCGCCAACTTGT                                                                       <  2:308602/68‑1     ACCGAGTACATTCGGCACAATGTGGCGAATAACAATGCCCGATGTCGATACACCGCCAACTTGTGCCG                                                                   >  2:863575/1‑68          tTACATTCGGCACAATGTGGCGAATAACAATGCCCGATGTCTATACACCGCCAACTTGTGCCGAATGT                                                              <  2:914166/67‑1                                      AATGCCCGATGTCGATACACAGCCAACTTGTGCCGAATGTACAAGGTGTGGTGGTAGTCTACGCATCA                                  >  2:897729/1‑68                                         GCCCGATGTCGATACACCGCCAACTTGTGCAGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTT                               >  2:764384/1‑68                                                                 TTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCGTCACTTCTGGTGCCCAGCAAGATCCTCTTT       >  1:649922/1‑68                                                                 TTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTT       >  1:136689/1‑68                                                                 TTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTT       >  1:24746/1‑68                                                                 TTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTT       >  1:316228/1‑68                                                                      CCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTTGAATC  >  2:376608/1‑68                                                                                                                                           CCACACCGAGTACATTCGGCACAATGTGGCGAATAACAATGCCCGATGTCGATACACCGCCAACTTGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1304497‑1304426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgccgAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTTGAATC  >  NC_000913/1304482‑1304546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.