New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1362001 =	19 (0.860)	4 (0.210)	4/114	1.4	19.8%	coding (91/558 nt)	puuR	repressor for the divergent puu operons, putrescine inducible
	?	NC_000913	1362051 =	16 (0.840)					coding (141/558 nt)	puuR	repressor for the divergent puu operons, putrescine inducible
Rejected: Frequency below/above cutoff threshold.

GCAGCTTTTGCAGCGTACTGATGGCAGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGTGAGTCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1362076‑1362001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcagcccTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTT  >  NC_000913/1362051‑1362110                                                                                                                                          GCAGCTTTTGCAGCGTACTGATGGCAGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGTGA                                                                      >  1:555589/1‑68      TTTTGCAGCGTACTGATGGCAGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGTGAGTCAG                                                                 <  1:449932/68‑1            AGCGTACTGATGGCTGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGTGAGTCAGCCCTGC                                                           <  1:63997/68‑1                        GCAGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGCGAGTCAGCCCTGCCATCAGTACGCT                                               <  2:489814/68‑1                                          TGTTCTTTCGTACTGATAGCACTCCGAGTCTGCCCGGCCAGCAGTACGCTGCAAAAGCTGCTGAAGGT                             <  1:660106/68‑1                                              CTATCGTACTGATAGCACTGTGAGTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTAT                         <  2:97965/68‑1                                                                     GTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTT  >  2:802108/1‑68                                                                     GTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCAGAAGGTGTATGGTCTGTCACTCTCGGAATTCTT  >  1:264671/1‑68                                                                                                                                          GCAGCTTTTGCAGCGTACTGATGGCAGGGCTGACTTTATCTTGTTCTATCGTACTGATAGCACTGTGAGTCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1362076‑1362001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcagcccTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTT  >  NC_000913/1362051‑1362110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.