New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 36368536 (0.270)4 (0.230) 4/104 1.3 42.8% coding (558/1203 nt) yhiN putative oxidoreductase
?NC_000913 = 3636839 6 (0.350)coding (572/1203 nt) yhiN putative oxidoreductase

TAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3636799‑3636853
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacccgcgcgggtcTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTG  <  NC_000913/3636839‑3636790
                                                                                                         
cAACTCTTCGAGCTACGGTCTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCTGGTGCCATTCAC                                       <  2:55592/67‑1
                      TGCAGAGTGAATGGCACCAGACCCGCGCGGGTCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAA                 >  1:183678/1‑68
                          GAGTGAATGGCACCAGACCCGCGCGGGCCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGT             <  2:511370/68‑1
                                     ACCAGACCCGCGCGGGTCTGGTGCAATTCACTCTGCATAAAACGTTGCTCGAAGAGTTACAGGTGCTG  >  2:105741/1‑68
                                                                                                         
TAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3636799‑3636853
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacccgcgcgggtcTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTG  <  NC_000913/3636839‑3636790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.