New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3636853	6 (0.270)	4 (0.230)	4/104	1.3	42.8%	coding (558/1203 nt)	yhiN	putative oxidoreductase
	?	NC_000913	= 3636839	6 (0.350)					coding (572/1203 nt)	yhiN	putative oxidoreductase

CAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGA  >  NC_000913/3636790‑3636903                                                  |                                                                 cAGCACCTGTAACTCTTCGAGCAACGTTTTATGCAGAGTGAATTGCACCAgacccgcgcgggtctggt                                                >  2:105741‑M2/1‑50 (MQ=255)          caacTCTTCGAGCTACGGTCTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcac                                       <  2:55592‑M1/67‑14 (MQ=255)            aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAggcccgcgcgggtctggtgccattcactc                                     <  2:511370‑M2/68‑30 (MQ=255)             ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGc                                    >  2:722264/1‑68 (MQ=255)                ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgca                                 >  1:183678‑M2/1‑35 (MQ=255)                          ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCgcc                       >  1:90861/1‑66 (MQ=255)                                tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaa                 >  1:183678‑M1/1‑33 (MQ=255)                                 gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCACTCTta                >  1:449533/1‑68 (MQ=255)                                  cAGAGTGAATGGCACCAGACCAGCGCGGGTCGGAAGCACGTTGAGGCAAAATTGTTCGGCAATCTtat               >  2:806211/1‑68 (MQ=255)                                    gagTGAATGGCACCAGACCCGCGCGGGCCtggtgccattcactctgcataaaccgttgctcgaagagt             <  2:511370‑M1/68‑40 (MQ=255)                                      gTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcatagaccgtagctcgaagagttg           <  2:55592‑M2/68‑56 (MQ=255)                                               acccgacccgCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAACCGGCgc  >  2:704182/1‑67 (MQ=255)                                               aCCAGACCCGCGCGGGTCtggtgcaattcactctgcataaaacgttgctcgaagagttacaggtgctg  >  2:105741‑M1/1‑18 (MQ=255)                                               aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGa  >  1:333368/1‑68 (MQ=255)                                                  |                                                                 CAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGA  >  NC_000913/3636790‑3636903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.