Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	583538	583579	42	4 [3]	[3] 4	tfaX/appY	pseudogene, DLP12 prophage;Phage or Prophage Related/global transcriptional activator; DLP12 prophage

ATAGTAAGCGTTGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACATACATATAATAATTTAATCTTAAATGAAATTTATTAAAATTTGCAAACT  >  NC_000913/583468‑583569                                                                      |                                 aTAGTAAGCGTTGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACATAC‑‑ATAATAATTTaa                                  >  2:883922/1‑68 (MQ=255)      aaGCGTTGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACATACATATAATAATTTAATCt                               >  2:79573/1‑68 (MQ=255)                                                           ataataATTTAATCTTAAATGAAATTTATTAAAATTTGCAAACt  <  1:224668/44‑1 (MQ=255)                                                           ataataATTTAATCTTAAATGAAATTTATTAAAATTTGCAAACt  >  2:224670/1‑44 (MQ=255)                                                                      |                                 ATAGTAAGCGTTGAAAAATGTAACTTTGAAATAAGTTAGAATAAAAAACAACATACATATAATAATTTAATCTTAAATGAAATTTATTAAAATTTGCAAACT  >  NC_000913/583468‑583569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑