New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3538165 =28 (0.910)4 (0.150) 4/118 2.3 16.7% coding (781/2322 nt) yhgF putative transcriptional accessory protein
?NC_000913 3538246 = 15 (0.550)coding (862/2322 nt) yhgF putative transcriptional accessory protein
Rejected: Frequency below/above cutoff threshold.

ATGCGCCACGTCCAGCTCACCACGCCTTTGCGCCAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCCAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3538238‑3538165
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggtgCTGATGCATCTGGAAACCGAACTGATGGGCACCGTGCGCGAACGTGCGGAAGATGAAGCAATCAACG  >  NC_000913/3538246‑3538312
                                                                                                                                             
ATGCGCCACGTCCAGCTCACCACGCCTTTGCGCCAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCC                                                                           >  1:730432/1‑68
   CGCCACGTCCAGCTCACCACGCCTTTGCGCCAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCCAAG                                                                        <  1:1086875/68‑1
      aACGTCCAGCTCACCACGACTTAGCGCCAGCAATCCGCCGTGGAATTGTTCAGGCGCAGGCCAAGGTG                                                                     >  2:268833/2‑68
            CAGCTCACCACGCCTTTGCGCCAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCCAAGGTGCTGATG                                                               >  1:953373/1‑68
                                 CAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCCAAGGTGCTGATGCATCTGGAAACCGAACTGATG                                          <  2:953370/68‑1
                                                       TCAGGCGCAGGCCAAGGTGCTGATGCATCTGGAAACCGAACTGA                                            >  1:506962/1‑44
                                                       TCAGGCGCAGGCCAAGGTGCTGATGCATCTGGAAACCGAACTGA                                            <  2:506962/44‑1
                                                                         GCTGCTGCATCTGGAAACCGAACTGATGGGCACCGTGCGCGAACGTGCGGAAGATGAAGCAATCAACG  >  2:771443/1‑68
                                                                                                                                             
ATGCGCCACGTCCAGCTCACCACGCCTTTGCGCCAGCTATCCGCCGGGGCATTGTTCAGGCGCAGGCCAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3538238‑3538165
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggtgCTGATGCATCTGGAAACCGAACTGATGGGCACCGTGCGCGAACGTGCGGAAGATGAAGCAATCAACG  >  NC_000913/3538246‑3538312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.