| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3538165 = | 28 (0.910) | 4 (0.150) | 4/118 | 2.3 | 16.7% | coding (781/2322 nt) | yhgF | putative transcriptional accessory protein |
| ? | NC_000913 | 3538246 = | 15 (0.550) | coding (862/2322 nt) | yhgF | putative transcriptional accessory protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCTGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGTG > NC_000913/3538098‑3538232 | cgttgattgcttcatcttccgcacgttcgcgcacggtgcccatcagttcggtttccagatgcagcagc > 2:771443‑M1/68‑68 (MQ=255) tGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCAc < 1:1141490/68‑1 (MQ=255) tGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCAc < 2:516104/68‑1 (MQ=255) tGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCAc < 1:390019/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 2:353449/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 2:756518/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 2:336201/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 1:595960/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 2:580716/68‑1 (MQ=255) ccACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTgcg < 2:640050/68‑1 (MQ=255) acaGTTCGATGAGCCGCCCAAAGAGAGCTAATGCGAGCAAATCATCATGGATCACCTTGGCCTGAGcc > 2:219127/1‑68 (MQ=255) aGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTg > 1:353646/1‑68 (MQ=255) tCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAAc > 1:1059532/1‑68 (MQ=255) aTGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAAt < 2:623290/68‑1 (MQ=255) cccAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCcggc < 2:191395/68‑1 (MQ=255) ccAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCcggcg < 1:799838/68‑1 (MQ=255) aaaGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGa < 1:405475/68‑1 (MQ=255) agagATAATGAGAGCAAATCATCAAGGAACACCATGGCCTGCGCCTGACAACTGACCCGGCGGATAGc > 1:199332/1‑68 (MQ=255) catcagttcggtttccagatgcatcagCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTg < 2:953370‑M1/41‑1 (MQ=255) tcagttcggtttccagatgcatcagCACCTTGGCCTGCGCCTGa > 1:506962‑M1/26‑44 (MQ=255) tcagttcggtttccagatgcatcagCACCTTGGCCTGCGCCTGa < 2:506962‑M1/19‑1 (MQ=255) cTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGgc < 2:453893/68‑1 (MQ=255) tGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCaa > 1:753234/1‑68 (MQ=255) gAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAgg < 1:671294/68‑1 (MQ=255) gAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCACGGCGGATAGCTGGCGCAAAgg > 1:737617/1‑68 (MQ=255) gCAAATCATCATGGATCACCTTGGCCTGCGCCTGAAAAATGCCCCGGCGGATAGCTGGCGCAAAGGCg > 2:980174/1‑68 (MQ=255) tcatcaTGGATCGCCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAGAGGCgtgggg > 2:733457/1‑66 (MQ=255) tcatcaTGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCgtggtg < 1:135022/68‑1 (MQ=255) tcatGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGc > 1:216887/1‑68 (MQ=255) tcatGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGc > 1:148324/1‑68 (MQ=255) catcagCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTg > 1:953373‑M1/7‑68 (MQ=255) ggATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGa > 1:136695/1‑68 (MQ=255) tCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGt > 2:1044600/1‑68 (MQ=255) CACCTTGGCCTGCGCCTGAACAATTCCACGGCGGATTGCTGGCGCTAAGTCGTGGTGAGCTGGACgtt > 2:268833‑M1/1‑67 (MQ=255) | GCTGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGTG > NC_000913/3538098‑3538232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |