| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3704467 = | 29 (0.950) | 7 (0.260) | 3/116 | 2.6 | 20.2% | coding (295/903 nt) | dppC | dipeptide/heme ABC transporter permease |
| ? | NC_000913 | 3704731 = | 30 (1.120) | coding (31/903 nt) | dppC | dipeptide/heme ABC transporter permease | |||||
GCCGAGAATAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCATCGGTGCCCAGCAAGTGC > NC_000913/3704402‑3704528 | cccgcgtattcgtcataagaagtaaggggacatcatgtcacaggttactgaaaataaagtgattagcg < 2:220340‑M1/3‑1 (MQ=255) ccgcgtattcgtcataagaagtaaggggacatcatgtcacaggatactgaaaataaagtgattagcgc < 2:837874‑M1/4‑1 (MQ=255) ccGAGAATAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGgcgcgc < 1:224451/68‑1 (MQ=255) ccGAGAATAACGCCCATAATCAGCGATAACACAACAACCAGACAGCAAACCAGCAGCGACAGgcgcgc > 2:1068224/1‑68 (MQ=255) cgcgtattcgtcataagaagtaaggggacatcatgtcacaggttactgaaaataaagtgattaGCGCa > 1:520340‑M1/64‑68 (MQ=255) agaATAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCGcc < 2:299570/68‑1 (MQ=255) aTAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTa < 1:383925/68‑1 (MQ=255) aTAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTa < 1:757116/68‑1 (MQ=255) aTAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTa < 1:1091668/68‑1 (MQ=255) gCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCa > 2:223106/1‑68 (MQ=255) cccATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAg < 1:854353/68‑1 (MQ=255) aTCAGCGATAACACAGCGACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGa > 2:1083664/1‑68 (MQ=255) tCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGAc < 1:1090644/68‑1 (MQ=255) aGCGATAACACAACTGCCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGCCAg > 2:871073/1‑68 (MQ=255) gCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGc < 2:458989/68‑1 (MQ=255) cGATAGCACAACTACCAGACAGCCAACCAGCAGCGCCAGGCGCGCACCGTACATCAGGCGCGACAGca > 2:519337/1‑68 (MQ=255) cacaACTACCAGCCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGGCAGCACCTcgc > 2:537517/1‑66 (MQ=255) acaACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACg < 1:148273/68‑1 (MQ=255) caACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACgg < 1:331526/68‑1 (MQ=255) cTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCt < 1:223106/68‑1 (MQ=255) cTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCt > 2:450311/1‑68 (MQ=255) tACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTa < 1:918877/68‑1 (MQ=255) tcgcaggttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTAc < 2:689723‑M1/40‑1 (MQ=255) tcacaggttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTAc < 2:40556‑M1/40‑1 (MQ=255) tcacaggttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTAc < 1:178855‑M1/40‑1 (MQ=255) tcacaggttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTAc < 2:709964‑M1/40‑1 (MQ=255) acacaggttactgaaaataaagtgataaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTAc < 1:405368‑M1/40‑1 (MQ=255) aCCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTGCATCAGGCGCGACAGCACATCACGGCCTAc > 2:245325/1‑68 (MQ=255) ccAGACAGCCACCCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACg < 2:68730/68‑1 (MQ=255) cacaggttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACg < 1:206175‑M1/41‑1 (MQ=255) gACAGCCGGCCAGCAGCGACAGGCGCGCACCGTACAACAGGCGCGACAGAACATAACGGCCAACgaaa > 2:959859/1‑65 (MQ=255) aCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGTCAGgaca > 1:1095012/1‑52 (MQ=255) aCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGTCAGcaca < 2:1095007/52‑1 (MQ=255) aCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCAt > 2:588298/1‑68 (MQ=255) aCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCAt > 1:1102943/1‑68 (MQ=255) aCAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCAt > 2:985393/1‑68 (MQ=255) gttactgaaaataaagtgattaGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCATc > 2:206175‑M1/23‑68 (MQ=255) cAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCATc < 2:656336/68‑1 (MQ=255) aCAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCATCGGTGCCCAGCAAGTgc < 1:1012078/68‑1 (MQ=255) | GCCGAGAATAACGCCCATAATCAGCGATAACACAACTACCAGACAGCCAACCAGCAGCGACAGGCGCGCACCGTACATCAGGCGCGACAGCACATCACGGCCTACGTCATCGGTGCCCAGCAAGTGC > NC_000913/3704402‑3704528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |