| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3704467 = | 29 (0.950) | 7 (0.260) | 3/116 | 2.6 | 20.2% | coding (295/903 nt) | dppC | dipeptide/heme ABC transporter permease |
| ? | NC_000913 | 3704731 = | 30 (1.120) | coding (31/903 nt) | dppC | dipeptide/heme ABC transporter permease | |||||
ACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGG > NC_000913/3704664‑3704795 | acCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCt > 2:133602/1‑68 (MQ=255) ccTTTGTCGCGTCTAAAATAGTGCCAGAACCCCTGTAACGGGGGCATCGGCACCGGCGCGCTAATCAc < 2:264658/68‑1 (MQ=255) tttGTTGCGTTTAAAATAGCGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACtt < 2:1107402/68‑1 (MQ=255) gttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTAt < 2:1024425/68‑1 (MQ=255) cGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTc < 1:42736/68‑1 (MQ=255) cGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTc < 1:404403/68‑1 (MQ=255) aaaaTTTTGCCATATCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCTCTTTATTTTCAGTat < 2:466466/68‑2 (MQ=255) gatgacgtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAAc > 2:206175‑M2/47‑68 (MQ=255) aaTAGTGCGATAACTCCTGTTACGGGGTCATCGTCACTGGTGCTATAATCACTTTATTTTCAGTTAcc < 2:129910/68‑1 (MQ=255) aaTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAAcc < 1:871076/68‑1 (MQ=255) aTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCt > 1:796388/1‑68 (MQ=255) aGTGCCAGTTCTCCTGTTTCGGGGTCATCGGCTCCGGTTCGCTTTTCACTTTATTTTCAGTAACCtgt < 2:365399/68‑1 (MQ=255) aGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCtgt < 1:588298/68‑1 (MQ=255) aGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCtgt < 2:1126637/68‑1 (MQ=255) cgtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAACCtgtg < 1:206175‑M2/27‑1 (MQ=255) tGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGa < 1:1090584/68‑1 (MQ=255) tGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGa < 2:885309/68‑1 (MQ=255) tGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGa < 1:175694/68‑1 (MQ=255) gtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTTATCACTTTATTTTCAGTAACctgtgt < 1:405368‑M2/28‑2 (MQ=255) gtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAACCTGTGa < 2:709964‑M2/28‑1 (MQ=255) gtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAACCTGTGa < 1:178855‑M2/28‑1 (MQ=255) gtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAACCTGTGa < 2:40556‑M2/28‑1 (MQ=255) gtaggccgtgatgtgctgtcgcgcctgatgtacggtgcgcTAATCACTTTATTTTCAGTAACCTGCGa < 2:689723‑M2/28‑1 (MQ=255) cgCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGa < 2:1096689/67‑1 (MQ=255) cAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACat < 1:481963/68‑1 (MQ=255) tCCTGTAACGGGGTCAGCGGCACCTGTGCGCTAATCACTTTATTTTCAGTAACCTGCGACATGATGTc < 2:913699/68‑1 (MQ=255) tCCTGTAAATGGGTCATAGGAACCGGTGCGCTAATCACTTTATTATCAGTAAACTGTGACATGAAGTc > 1:250939/1‑68 (MQ=255) ccTGTAACGGGGCCATCGGCACCGGCGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTcc < 2:159558/68‑1 (MQ=255) aaCGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTa > 1:972122/1‑68 (MQ=255) aaCGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTa > 1:218922/1‑68 (MQ=255) cGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTAct > 1:876459/1‑68 (MQ=255) cGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTAct > 2:83105/1‑68 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAGCCTGTGACATGATGTCCCCTTActtct > 2:297644/1‑68 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTActtct > 1:843084/1‑68 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTActtct > 1:651496/1‑68 (MQ=255) cGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGAc < 1:149914/68‑1 (MQ=255) gCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGa < 2:426831/68‑1 (MQ=255) tgcgcTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATAcgcg > 1:520340‑M2/6‑68 (MQ=255) gcgcTAATCACTTTATTTTCAGTATCCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCgg < 2:837874‑M2/64‑1 (MQ=255) cgcTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCggg < 2:220340‑M2/65‑1 (MQ=255) | ACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGG > NC_000913/3704664‑3704795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |