| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3927418 = | 23 (0.750) | 5 (0.200) | 3/108 | 2.4 | 24.5% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | 3927457 = | 12 (0.480) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
TTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCA > NC_000913/3927353‑3927483 | ttacgcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgggg > 1:193340‑M1/66‑68 (MQ=255)ttCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCggg < 1:911987/68‑1 (MQ=255) tCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGc < 2:1020992/68‑1 (MQ=255) gagttcacagtcacactggtaaacatagaacgagtgcaacggagaaagacggtcttcatcgGGGCGaa < 1:1059500‑M1/7‑1 (MQ=255) cgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAg < 2:607937‑M1/8‑1 (MQ=255) aGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAg > 1:1133085/1‑68 (MQ=255) gTGGTTCATTCGCTGGCGAAGTGGAAACGTCAGACCTGGGGGCGACACGGCTTCAGCGCGGGAGAAgg > 2:83954/1‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGc > 1:826566/1‑63 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGc < 2:826563/63‑1 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg < 1:598382/68‑1 (MQ=255) cccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcctcgGGGCGAAGGGCt < 2:344885‑M1/12‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:823687/68‑1 (MQ=255) tcaCTGGCGAAGTGGAAGCGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 2:4860/1‑68 (MQ=255) caCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACg < 1:4860/68‑1 (MQ=255) tggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGc < 2:2498‑M1/11‑1 (MQ=255) tggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGc > 1:2498‑M1/46‑56 (MQ=255) gCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACAt < 2:380550/68‑1 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 2:356050‑M1/44‑68 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 2:559046‑M1/44‑68 (MQ=255) tGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGc > 1:607937/1‑68 (MQ=255) tGGAAAAGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGAGAAGGGCTGTACACGCAAATGAAAGc > 1:690414/1‑68 (MQ=255) cGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGGAGGGCTGTACACGCACATGGAAGCCCTTCg > 2:109182/1‑68 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGCGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGcc < 1:29151/68‑1 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGcccgcg < 2:1038120/68‑4 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:443052/68‑1 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 1:389625‑M1/17‑41 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg < 2:389625‑M1/25‑1 (MQ=255) acacGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTc < 1:281741/68‑1 (MQ=255) ggtcttcatcgGGGCGAAGGGCTGTACACGAACATGAAAGACCTTCGCACAGATGAAGACCGTCTTtc < 1:32177‑M1/57‑1 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 2:993127/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 2:55960/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:637229/1‑68 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:1122297/1‑68 (MQ=255) gcgGGCGAAGGGCTGTACAAGCACATGAACGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCa > 1:617710/1‑68 (MQ=255) | TTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCA > NC_000913/3927353‑3927483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |