| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3927418 = | 23 (0.750) | 5 (0.200) | 3/108 | 2.4 | 24.5% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | 3927457 = | 12 (0.480) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
ACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAA > NC_000913/3927392‑3927521 | aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:443052/68‑1 (MQ=255) gaaagacggtcttcatctgtgcgaaggtctttcatgttcgtgtacagcccttcgcccCGATGAAGAcc < 1:32177‑M2/11‑1 (MQ=255) acacGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTc < 1:281741/68‑1 (MQ=255) ggtcttcatcgGGGCGAAGGGCTGTACACGAACATGAAAGACCTTCGCACAGATGAAGACCGTCTTtc < 1:32177‑M1/57‑1 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 2:993127/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:637229/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 2:55960/1‑68 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:1122297/1‑68 (MQ=255) gcgGGCGAAGGGCTGTACAAGCACATGAACGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCa > 1:617710/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:528344‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:1042045‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 1:1090729‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 1:557491‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 1:993132‑M1/1‑68 (MQ=255) GGCTGTTCACGCACATGATAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 1:216929‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGGCCGTCTTTCTCCGTTGCACTCGGTCTAt < 2:361254‑M1/68‑1 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 2:65016‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 1:988447‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:65016‑M1/68‑1 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:19328‑M1/68‑1 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:352394‑M1/68‑1 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGACCGTCtt < 2:389625‑M2/16‑1 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGACCGTCtt > 1:389625‑M2/26‑41 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 2:356050‑M2/26‑68 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 2:559046‑M2/26‑68 (MQ=255) acacGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 2:953988/1‑68 (MQ=255) acGCACATGAAAGCCCTTCGACCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCa > 2:1037859/1‑68 (MQ=255) cacaTGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:1044741/1‑52 (MQ=255) cacaTGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg < 1:1044746/52‑1 (MQ=255) caTGAAAGCCCTGCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTggg < 2:543057/68‑1 (MQ=255) agcccttcgcccCGAGGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTggg < 2:344885‑M2/56‑1 (MQ=255) gcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCa < 2:2498‑M2/45‑1 (MQ=255) gcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCa > 1:2498‑M2/12‑56 (MQ=255) cttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAAcg < 2:607937‑M2/60‑1 (MQ=255) ttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGTTCTATGTTTACCAGTGTGACTGTGaactc < 1:1059500‑M2/61‑3 (MQ=255) cccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTaa > 1:193340‑M2/4‑68 (MQ=255) | ACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAA > NC_000913/3927392‑3927521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |