New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4392402 | 11 (0.360) | 3 (0.110) | 3/116 | 2.6 | 22.5% | noncoding (43/76 nt) | glyV | tRNA‑Gly |
? | NC_000913 | = 4392497 | 11 (0.410) | noncoding (26/76 nt) | glyX | tRNA‑Gly |
ATTTGAAAAGTGCTGCAAAGCACAGACCACCCAAGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGTGCTGT > NC_000913/4392438‑4392564 | aTTTGATAAGAGCTGCAACGCACAGACCACCCAAGCGGGAATAGCTCAGTTGGTAGAGCAcgaccttg > 2:923819‑M2/1‑60 (MQ=255) aTTTGAAAAGTTCTTCATATCACAGACCACCCAAGCGGGAATAGCTCAGTTGGTAGAGCAcgaccttg > 2:397239‑M2/1‑60 (MQ=255) aTTTGAAAAGTTCTTCAAATCACAGACCACCCAAGCGGGAATAGCTCAGTTGGTAGAGCAcgaccttg > 1:562043‑M2/1‑60 (MQ=255) aaaGCACAGACCACCCAAGCGGGAATAGCTCAGTTTGTAGAGCACGACCTTGCCAAGGTCGGGGTcgc < 1:507725/68‑1 (MQ=25) accaccCAAGCGGGAATAGCTCAGTTGGTAGAGCAcgaccttggcaaggtagtgctcaaccaacagag < 1:865720‑M2/68‑34 (MQ=255) aTAGCTCAGTTGGTAGAGCAcgaccttggcaaggtcgtgctctgccaactgagcgattgccgcgtacg < 2:146917‑M2/68‑49 (MQ=255) aTAGCTCAGTTCGCAGCGCActacctcgccaaggtcgtgctctaccaactgagctattcccgcgtact > 1:193286‑M2/1‑20 (MQ=255) tAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGCGTCTCGTTTCCCGCTACAAAATTTGAAAg > 1:78236/1‑68 (MQ=255) tAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATATGAAAg > 1:651199/1‑68 (MQ=14) agagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGt < 2:438013/68‑1 (MQ=33) agagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGt < 2:447810/68‑1 (MQ=33) agagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGt < 2:635464/68‑1 (MQ=33) agagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGt < 2:931680/68‑1 (MQ=33) gagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGTg > 2:1020208/1‑68 (MQ=35) gagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATATGCAAGTg > 2:876852/1‑68 (MQ=255) aCGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGTGCTGt > 2:865717/1‑68 (MQ=40) aCGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGTGCTGt < 1:640084/68‑1 (MQ=40) | ATTTGAAAAGTGCTGCAAAGCACAGACCACCCAAGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAAATTTGAAAGTGCTGT > NC_000913/4392438‑4392564 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |