| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1164698 = | 32 (1.040) | 4 (0.150) | 4/114 | 2.2 | 11.5% | coding (604/1026 nt) | nagZ | beta N‑acetyl‑glucosaminidase |
| ? | NC_000913 | 1165027 = | 34 (1.290) | coding (933/1026 nt) | nagZ | beta N‑acetyl‑glucosaminidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGATAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATG > NC_000913/1164961‑1165088 | aGATAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGAc > 2:518955/1‑68 (MQ=255) aTAATCTGTCGCCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAg > 2:232272/1‑68 (MQ=255) aTAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAg > 1:264723/1‑68 (MQ=255) aTAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAg > 2:746134/1‑68 (MQ=255) aaTCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGa > 2:63360/1‑68 (MQ=255) aaTCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGa > 2:517349/1‑68 (MQ=255) aTCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGaa > 1:278656/1‑68 (MQ=255) gccGGTCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAGCTGATgg > 2:269806/2‑68 (MQ=255) ccGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGa < 1:1111454/68‑1 (MQ=255) acatcactgtagatcacatgcgcaggcataatggcgtcgagttcattttcgcgACAGGAACTGATGGa < 1:257813‑M2/15‑1 (MQ=255) aTCAAGGCAGAACGTGTTTCACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTc > 1:968235/1‑68 (MQ=255) agatcacatgcgcaggcataatggcgtcgagtttattttcgcgACAGGAACTGATGGACTCGGCTCGc < 2:159794‑M2/25‑1 (MQ=255) aCGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGa > 1:299598/1‑68 (MQ=255) aCGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGa > 1:31031/1‑68 (MQ=255) aCGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGa > 1:895487/1‑68 (MQ=255) aCGTGTTACACGATAGTATCATAAAGGTTCATTTTCGCGACAGGAACAGATGGACTCGGCTCGCTGGa > 2:389526/1‑68 (MQ=255) cGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGaa < 2:113983/68‑1 (MQ=255) cGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCCGGag > 2:562138/1‑67 (MQ=255) gcaggcataatggcgtcgagtttattttcgcgACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGAt > 1:844284‑M2/33‑68 (MQ=255) acacGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGAt < 1:291988/68‑1 (MQ=255) acGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCa > 1:629334/1‑68 (MQ=255) cGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAg > 2:896230/1‑68 (MQ=255) tggcgtcgagttcattttcgcgACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGt < 2:618067‑M2/46‑1 (MQ=255) aTCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGt < 2:805261/68‑1 (MQ=255) aTCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGt < 2:1010977/68‑1 (MQ=255) aTCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGt < 1:969376/68‑1 (MQ=255) aTCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGt > 1:45383/1‑68 (MQ=255) aTAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTg > 2:536780/1‑68 (MQ=255) aaaGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGaa > 2:374293/1‑68 (MQ=255) aaaGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGaa > 2:558589/1‑68 (MQ=255) aaaGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGaa > 2:83384/1‑68 (MQ=255) aGGTTCATTTTCGCGACAGGAACTGAAGGCATCGGCTCGCTGGAAAGCGAACAGCACCCGTCTGAATc > 2:309613/1‑68 (MQ=255) ggTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCTATCAGCACCCGTCTGAATCa > 1:579453/1‑68 (MQ=255) ggTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCa > 2:305377/1‑68 (MQ=255) ggTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCa < 1:411881/68‑1 (MQ=255) gTTCATTTTCGCGACAGTAACTGATGGACTCGTCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAg < 1:1142898/68‑1 (MQ=255) gTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAg < 1:877748/68‑1 (MQ=255) cATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTa < 2:991152/68‑1 (MQ=255) tttcgcgACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACAt > 1:1137299‑M2/8‑68 (MQ=255) ttcgcgACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCGCCCGTCTGAATCAGTTACATg > 1:219331‑M2/7‑68 (MQ=255) | AGATAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATG > NC_000913/1164961‑1165088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |