| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3831044 | 17 (0.550) | 8 (0.310) | 3/110 | 2.5 | 38.0% | coding (588/1710 nt) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein |
| ? | NC_000913 | = 3831092 | 12 (0.470) | coding (636/1710 nt) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein | |||||
TAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACG > NC_000913/3831026‑3831148 | tAACGATCGCGTTACGCTGACTAACCAGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGc < 2:627303‑M2/68‑2 (MQ=255)tAACGATCGCGTTACGCAGACTAACCTGGGTGCCGACAAAGACCGCGGGACATAAACCGGAAACGCGc < 1:1085943‑M2/68‑2 (MQ=255) aCGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcag < 2:733842‑M2/68‑4 (MQ=255) cGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagc > 1:950047‑M2/1‑64 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTTGCCGGAAGCGCGCGGCGTGACGCCGGCGGCGGCTGGcg > 2:195392/1‑67 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatac < 1:873918‑M2/68‑27 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatac < 2:687188‑M2/68‑27 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatac < 1:752897‑M2/68‑27 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgtta > 2:1028324‑M2/1‑42 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgtta < 1:586926‑M2/61‑20 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgtta < 1:1028329‑M2/61‑20 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgtta > 2:586926‑M2/1‑42 (MQ=255) cTGGGTGCCGACATCGCCCGCGGGACAATAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCa > 1:996505/1‑68 (MQ=255) cTGGGTGCCGACATCGCCAGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGct > 1:823706/1‑67 (MQ=255) gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTg < 2:440469/68‑1 (MQ=255) cATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAcc > 1:185834/1‑68 (MQ=255) aTCGCCCGCGGGACATTAACCGGAAACGCGcagcgtaacgcgatcgttatcaatactgccttcaatca > 2:752895‑M2/1‑30 (MQ=255) cccGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcgc > 2:658936/1‑68 (MQ=255) gggACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGc < 2:723789/68‑1 (MQ=255) gACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCgg < 1:295404/68‑1 (MQ=255) tAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGAtata < 2:197354/68‑1 (MQ=255) aCCTGAAACTCTCAGCTTAACGCCGACGGCAGCTGGCATGTTGAAATCCTGCGCTTGGCTGATATTCg < 2:132929/68‑1 (MQ=255) ccGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACg > 1:745561/1‑67 (MQ=255) ccGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACg < 2:745559/67‑1 (MQ=255) | TAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACG > NC_000913/3831026‑3831148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |