| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (–) +8 bp | coding (362‑369/648 nt) | acrR → | transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 30 (1.640) | 18/130 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 0 (0.000) | coding (369/648 nt) | acrR | transcriptional repressor | |||||
| * | ? | NC_000913 | = 258675 | NA (NA) | 37 (1.990) | 17/132 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 0 (0.000) | coding (362/648 nt) | acrR | transcriptional repressor | |||||
AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/257975‑257908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGTTCTTCTGT < NC_000913/486129‑486064 AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:444260/68‑1AGCTGCATGACAAAGTCATCGGGCATAATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:517202/68‑1 cGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACCATCAATAAGCTGGAGTCATTACCCAT < 2:108397/67‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAT > 1:198502/1‑68 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAT > 1:581569/1‑68 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 2:84783/1‑59 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:84783/59‑1 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAA < 1:326881/68‑1 CATCGGGCATTATCTGAACATAAAACACTATCATTAAGTTGGAGTCATTACCCATTTCTCCGACAAAT < 2:2538/68‑1 GGCATTATCTGGACATAGAACACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCg > 2:270054/1‑67 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAA < 2:363630/68‑1 ACATAATACTCTAGCAATAAGTTGGAGTCATTACCCATTTCTCCTACAAATTCGCATTTGTGGAATAT < 1:155437/68‑1 ACACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCC > 2:88405/1‑68 ACACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCC > 2:15631/1‑68 ACACTATCAATAAGTTGGAGTCATTAACCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTac > 1:292641/1‑66 cgCTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCg > 2:646414/3‑67 cgCTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCA > 2:577310/3‑68 CACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCA > 1:614036/1‑68 CACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCA > 1:365360/1‑68 CACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATT > 1:563332/1‑50 CACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATT < 2:563330/50‑1 ACTATCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCAT > 1:3810/1‑68 TCAATAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAAT < 1:127277/68‑1 TAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATC > 2:628839/1‑68 TAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATC < 1:260417/68‑1 TAAGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATATGTGGAATATAATCTCCATCAATAATC > 1:181039/1‑68 AGTTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGA > 2:351688/1‑68 TTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACG > 2:633896/1‑68 TTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGT < 2:42634/40‑1 TTGGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGT > 1:42634/1‑40 GGAGTCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC < 2:209892/68‑1 TCATTACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGTTC > 1:73817/1‑68 ttCCCATTTCTCCGTCAAATTCGCAGTTGTGGAATATAATCTCCATCAATAATCGACTCCGTTCTTCT < 2:531883/66‑1 CCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGCCGCCGTTCTTCTGa > 1:126453/1‑67 AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/257975‑257908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGTTCTTCTGT < NC_000913/486129‑486064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |