| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (–) +8 bp | coding (362‑369/648 nt) | acrR → | transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 30 (1.640) | 18/130 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 0 (0.000) | coding (369/648 nt) | acrR | transcriptional repressor | |||||
| * | ? | NC_000913 | = 258675 | NA (NA) | 37 (1.990) | 17/132 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 0 (0.000) | coding (362/648 nt) | acrR | transcriptional repressor | |||||
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258610‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACA > NC_000913/486122‑486188 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:258236/1‑68ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:6849/1‑68ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 1:258563/1‑68ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 1:263099/1‑68ACAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCGCCGA > 1:523015/1‑68 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCGAG < 2:268588/68‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCGAGA < 2:52142/68‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGA < 1:170129/68‑1 AGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGA > 1:530221/1‑68 AAGCCACTGGAGCACCTCATAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAA < 2:668326/68‑1 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAA < 1:144290/68‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAAT > 1:45787/1‑68 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATG < 2:492504/68‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTT > 2:56022/1‑68 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCAC > 1:661241/1‑68 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCAC > 2:146886/1‑68 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:663363/68‑1 CACCATCATACACTAAATCAGTAAGTCGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:347838/68‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:146886/68‑1 ACCATCATACACTAAATCAGTAAGTAGGAAGCATCACCGAGAAAAGGCAGATGTGCAACAGGCACAAa > 1:49865/1‑67 TCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAA > 1:581259/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 1:547078/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 2:552429/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 1:67335/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 2:620675/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 2:382594/1‑68 CTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 1:117717/1‑68 ATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGG > 1:152978/1‑68 TCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGA > 1:573700/1‑68 TCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGA > 1:17937/1‑68 TCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACG < 1:598034/53‑1 TCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACG > 2:598030/1‑53 TAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGT < 2:558926/68‑1 gcCAGCATCACCGAGAAATGTCTGTTGTGCAACAGGCACAAAGTAATCACTCTCAGGAAAGTTATGAa > 2:92869/3‑67 AGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:667569/68‑1 AGCATCACCGAGAAATGGCTGGTGCGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 2:569207/68‑1 CGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACA > 1:132160/1‑68 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258610‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACA > NC_000913/486122‑486188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |