| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3927418 = | 17 (0.920) | 6 (0.400) | 4/108 | 1.2 | 29.4% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | 3927457 = | 15 (0.990) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAC > NC_000913/3927359‑3927484 | gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg > 2:607923/1‑68 (MQ=255) tGGTTCATTCACTGGCGAAGTGGAAACGGCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAggg < 2:258670/68‑1 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac < 1:360143/68‑1 (MQ=255) ggCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGcaca < 1:358212/68‑1 (MQ=255) ggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt > 2:78059‑M1/45‑68 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 1:210937‑M1/44‑68 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacgggcttcatcgGGGCGAAGGGCTGTACACGCACATg > 2:86947‑M1/44‑68 (MQ=255) cGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATg < 2:618860/68‑1 (MQ=255) tGGAAGCGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTGCACGCACATGAAAGc > 2:392039/1‑68 (MQ=255) gAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGccc < 1:494926/68‑1 (MQ=255) gTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGc < 1:635642/68‑1 (MQ=255) cTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATg > 1:421270/1‑68 (MQ=255) ctAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGa < 2:299772/67‑1 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc < 2:321574/68‑1 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAca > 1:214848/1‑67 (MQ=255) gCAACAAGACTTCAGCGCTGGAGAAGGTCTGTACACGCACATGAAATCCCATCGCCCAGATGAAGaac > 1:103943/1‑66 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt < 2:148141‑M1/24‑1 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt > 1:148141‑M1/17‑40 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 2:130725/68‑1 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 1:581753/68‑1 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:22845/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCAATCGCCCCGATGAAGACCGTCTTTCTCCg > 1:620388/1‑68 (MQ=255) gGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAc < 2:481646‑M1/67‑1 (MQ=255) | GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAC > NC_000913/3927359‑3927484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |